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13-1236-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2104801 [Map]; Strand: w
      • AT1G06850.1 - [+] show detail - basic leucine-zipper 52
        Distance: -247; Region: promoter
      • AT1G06850.2 - [+] show detail - basic leucine-zipper 52
        Distance: -254; Region: promoter
    Flanking Genome Sequence: 13-1236-1 - 5-prime edge 
    GACGTGGGGA GATGTAATGC CATAACAGCT TAAATTAATA AATTTCGTTG 
    AAGCAACTAC AGAATCTTGT AATGAATGCT ACAAAGAAGA TTTAAAGTTA 
    AACAAATTTA AATCATGAAA TCGAATAATT AAATAAAATA CAAAGAAAAA 
    GGAAAAAAAA ATAAAAAAAA AGGGNGGGAN ACAANATGCT GCNANGGTTC 
    ACGTGCCAAT GNGCCTTTTA CTTTTCATCA ACTAGTTTTC TTTTTAATTA 
    TTAATAAATC ANCTCAATTT CNCAATTTTA TAGTTAGNGA CGTCACTTNT 
    NTNTCCTNAC ANAGTCNAGT TTCTCTCCTA CNCTCTTCAT TTCATTTCNT 
    TTGATNGAGA GAGAGAGAGA GAGANAAAGA GCTTCGTNTT NTTCATCNCC 
    ATCNTTATCN CCATNGACAT TGTTCTCAAT GGCNAATAAT AATCATANTT 
    NTTCACACAN CCAAAGCNTT NNTNTNTNAA ATTCTNTTAA AAAANGGGAA 
    AAATCANATC CTCCNCCAGN CCNAAAGCCN GGCNCCANTN TNATCCCCTC 
    CTCCGATCCA NTTNNTANTG CCGANCCGAT TCCATTTTTT TNNTTCCACC 
    GNNGATNTCG CTCCNACAAT ATGNCCATGT TCATGTNCNN GGATC

AT1G06850.1

Model type
Protein coding
Short Description
basic leucine-zipper 52
Computational Description
basic leucine-zipper 52 (bZIP52); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G40620.1); Has 1688 Blast hits to 1688 proteins in 185 species: Archae - 0; Bacteria - 22; Metazoa - 232; Fungi - 142; Plants - 1216; Viruses - 2; Other Eukaryotes - 74 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G06850.2

Model type
Protein coding
Short Description
basic leucine-zipper 52
Computational Description
basic leucine-zipper 52 (bZIP52); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G40620.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR