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13-1265-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 171587 [Map]; Strand: w
      • AT1G01460.1 - [+] show detail - Phosphatidylinositol-4-phosphate 5-kinase, core
        Distance: 422; Region: intergenic
      • AT1G01470.1 - [+] show detail - Late embryogenesis abundant protein
        Distance: 559; Region: intergenic
    Flanking Genome Sequence: 13-1265-1 - 3-prime edge 
    NNNGAGANGA ANAANTTATN NNTCNNAATG ATNNNACGAN AACAGGNCNN 
    GNCNGAGCNC ACNNTGNCCT ACTNAGNGTT CGGCCTTTTT NTGCAATGCN 
    TTCCNCTNGN CCCCNATTNN TNCCCATGGC TTANAACTTT NTGGAAAAAA 
    NNAGACTATG GCNGTTGGAT AAAGNCATGC ACTTGGTTCG GGTGAGATAT 
    TCAAATTGGT TTACTGGATT CGCTCCCGTT CGTATGGAAT TTCTAATTTC 
    AGTCTGGTTG GTTGGAATTA ACTCCGGTTT ATCTAAAATT TGCAATGTCA 
    GTCAGTATAT GTAAATAAGT TGATAAAGGA AATTTGAGCC TTGGAGGCTT 
    GGACGACCAA GGCCAAAGAG TTAAGAAAAG AAAGAGAAAT TTGGAGGTTG 
    CTTTTGCTTC ACAAACAAAT AAACTTTCGC TAAACTAAAT AAATAGTGGA 
    TATAAGTNGA AATGTTAANA CATGGAAGTT ATGTATCANT GAGAAGGATC 
    TTCGTCTGGT AAGAAGATN

AT1G01460.1

Model type
Protein coding
Short Description
Phosphatidylinositol-4-phosphate 5-kinase, core
Curator Summary
Type I phosphatidylinositol-4-phosphate 5-kinase, subfamily A.
Computational Description
PIPK11; FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity; INVOLVED IN: phosphatidylinositol metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, sepal, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol phosphate kinase 10 (TAIR:AT4G01190.1); Has 2109 Blast hits to 1621 proteins in 223 species: Archae - 0; Bacteria - 2; Metazoa - 980; Fungi - 317; Plants - 416; Viruses - 0; Other Eukaryotes - 394 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G01470.1

Model type
Protein coding
Short Description
Late embryogenesis abundant protein
Curator Summary
Encodes late-embryogenesis abundant protein whose mRNA levels are induced in response to wounding and light stress. Might be involved in protection against dessication.
Computational Description
LATE EMBRYOGENESIS ABUNDANT 14 (LEA14); CONTAINS InterPro DOMAIN/s: Water stress and hypersensitive response domain (InterPro:IPR013990), Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein (TAIR:AT2G46140.1); Has 340 Blast hits to 340 proteins in 93 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 329; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR