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Mutant Lines
13-1319-1

13-1319-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 131916 [Map]; Strand: w
- AT1G01320.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: -1346; Region: intergenic
- AT1G01340.1 - [+] show detail - cyclic nucleotide gated channel 10
  Distance: 412; Region: intergenic

CTGAAAACCG ACATACGAAA GAGACGTTGA TATTATACCG AACAAAACCA 
AAAGGAAACA TTGGTTGGTT TGCTTTGATT TCTCAAGGAA GAAGAGAGAA 
TGAGTGAGAT GTTGTTGGAG ATTAGCATTC TCCCTCAGGT TTTCATTATT 
AGGTTCTTCC AAAATAAAAA GGAAACTTTC GATTGTTTCC TTCTTCAAGA 
AAAGACATAA ACGCAAAAAA GTTTCTTTAA ACTCGGGAGT CAAAACAAGT 
TTAAGTAAAG TCCTAAACCT GACAGACCTT CTAACACTAG CCATTCTCTC 
ATAACCAACC CCAGTTTTGC TATGCATTAG CTTGAAAGCT AAATACGCTT 
TTCCCACTTT CCTCAATGCA TTGATCCTCG ATCCATGCAT GGCACTTCTC 
TTCCTCTCTC TGTAATCCCA ATCAGCTAGT TTTTCTTAGC TCCAGAACAT 
TATATTCCTT TTTCGTTTCA GTGAGCCACC CATTTTTATT TGATTCAAAT 
CTATGCAGAT CGAGTCTCTA ACTATACCTC CATGTGTGAT GCTGAACTGA 
TGTAGCCAGA GTTAAGCGGC TCATAAGAGC CAGCCCATTA TTTCAATTTC 
TGTTAGTTGA TAAACAATTT TTTACATTTT ATTGGTTCAA AGTTCAAACC 
ATTGTTTTTT ACACTTTATT CCACACACTA TACACATAAC ACATGCAAGA 
GA

AT1G01320.1

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G28080.1); Has 12123 Blast hits to 4846 proteins in 494 species: Archae - 106; Bacteria - 3214; Metazoa - 4973; Fungi - 1823; Plants - 555; Viruses - 79; Other Eukaryotes - 1373 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G01340.1

Model type: Protein coding
Short Description: cyclic nucleotide gated channel 10
Curator Summary: member of Cyclic nucleotide gated channel family
Computational Description: cyclic nucleotide gated channel 10 (CNGC10); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 13 (TAIR:AT4G01010.1); Has 3364 Blast hits to 3209 proteins in 253 species: Archae - 0; Bacteria - 35; Metazoa - 1554; Fungi - 48; Plants - 1027; Viruses - 0; Other Eukaryotes - 700 (source: NCBI BLink).
Link: InterPro Scan - TAIR