1. Home
  2. Mutant Lines
  3. 13-1341-1

13-1341-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8225054 [Map]; Strand: w
      • AT1G23190.1 - [+] show detail - Phosphoglucomutase/phosphomannomutase family protein
        Distance: 585; Region: intergenic
      • AT1G23200.1 - [+] show detail - Plant invertase/pectin methylesterase inhibitor superfamily
        Distance: -2124; Region: intergenic
    Flanking Genome Sequence: 13-1341-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT TCGTGCAATA TATTTTGTTT TCTCGAAAAA 
    GCTATGCATA TGAAAAAGCT AGCTAGTGAG AGAGTTAGCA TGTTCTGTTG 
    ATATGTCCAA AAACACCAAA CTCATCTTAA CGAACTACCA CTACCACTAC 
    CCGCACTACT TCGGTCTATC ACATTCATAA CACACAATAA GCAAAACAAA 
    ACCTATATAG TGACTCAAAA CTGATTCTAG TGAATCATAG ATGAAGTAAT 
    TAAGTCGAAT TTTAAGTAAC AAAAAACCTT GAATCGATGG AAGACAAACT 
    CCCACTCCCA ATAGTACGTA CCCACCCCCA TCTATCATCT CTAGATTTCA 
    ACTAGTGGTC TTAGCTTGTA CTCTTAATTT GTTATCACTT TCACGATTAT 
    GCATATATCC ATATTGTTGG CAAATATATT TTTTTGAGAT AAGTTATACA 
    ATTTTTCTTA AAACTTCAAG ATTTCATTGT CGATATGAAT T

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8225047 [Map]; Strand: w
      • AT1G23190.1 - [+] show detail - Phosphoglucomutase/phosphomannomutase family protein
        Distance: 578; Region: intergenic
      • AT1G23200.1 - [+] show detail - Plant invertase/pectin methylesterase inhibitor superfamily
        Distance: -2131; Region: intergenic
    Flanking Genome Sequence: 13-1341-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT 
    AATAATCAAA TTCTTTTTTT TCTCACGTTC ATATATTATG TATATGAATA 
    TGATTTATAC GACCACTCAA TTAGTCACAT GTTATTGATA CTTGACAGAA 
    CTCATTATGT CTGAATTTGG ATTTGAAATA TACTNGATAG GTCAATGATA 
    CAAATATTTG ATACTAAAAC TCAAAAGAGA AAGAAATCGA GTATAAGAAA 
    GATATACCTT ACACGAAATA AAGGATAGTG TGGTTTAAGT GGAGTAGAAA 
    GTTGAATGAA GCT

AT1G23190.1

Model type
Protein coding
Short Description
Phosphoglucomutase/phosphomannomutase family protein
Curator Summary
Encodes a cytosolic phosphoglucomutase (PGM). Two Arabidopsis PGM proteins (AT1G70730/PGM2 and AT1G23190/PGM3) have high sequence similarities and redundant functions. Mature plants possessing a single cPGM allele had a major reduction in cPGM activity. Whereas pgm2 and pgm3 single mutants are undistinguishable from the wild type, loss of both PGM2 and PGM3 severely impairs male and female gametophyte development.
Computational Description
Phosphoglucomutase/phosphomannomutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, magnesium ion binding, phosphoglucomutase activity; INVOLVED IN: response to cadmium ion, carbohydrate metabolic process; LOCATED IN: cytosol, nucleus, plasma membrane, chloroplast, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, conserved site (InterPro:IPR016066), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: Phosphoglucomutase/phosphomannomutase family protein (TAIR:AT1G70730.3); Has 7107 Blast hits to 7096 proteins in 2124 species: Archae - 111; Bacteria - 5258; Metazoa - 510; Fungi - 209; Plants - 166; Viruses - 0; Other Eukaryotes - 853 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G23200.1

Model type
Protein coding
Short Description
Plant invertase/pectin methylesterase inhibitor superfamily
Computational Description
Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT2G45220.1); Has 3098 Blast hits to 3048 proteins in 474 species: Archae - 14; Bacteria - 863; Metazoa - 1; Fungi - 203; Plants - 1990; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
Link
InterPro Scan - TAIR