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Mutant Lines
13-1364-1

13-1364-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 4; Position: 7876749 [Map]; Strand: w
- AT4G13550.1 - [+] show detail - triglyceride lipases;triglyceride lipases
  Distance: 0; Region: exon1 (5UTR)

NCTATAGNAA AAGGGGTGAN CNACTTGTTT CTAAGAAACA TNCCACCAGN 
TGCGGGAAAT GGACNATNGC AGTAANCCTC GCANGGGGGG CNCGCNGAAG 
ATNNCCAGAG NTACNNGNCC GGGCCAGNCG GACCACGCNG TGCCCNATNT 
GTGAGTGGAC GGAGGAAGTG AACAGAGAAG TGGAATNGCA NAGATGTCAT 
CGTTTGAAAT TNGAATTACC AGCCNGGGCC GGNGACCACG CGNGCNCNAT 
AANNAGGAGA AGNNGGNNNT NGNNGNANNA NNANGAAGAN GAGNNGTGGG 
GNNNNAGGNA AANGGGNAAN CNCNANAANN GNGGNGGGGG NGGANGGAAN 
NGAGGNGGGA AGANGNNNNN NNAANGNNGN GNAGGANNNG GANAGNAANG 
NGNNGNGNAG NGGANGNNNN GNGAGGGGNN NGGNGNNNNA NNGGGGNNNN 
GGGNGNGGGA NNGNNTNGNN NNNNNGAAGN GGNNNGGGGG GNNAGNNNNA 
NGGGGGGNNN NNNNAGANGN NNGGGGGGNG GGGGGGGGGG NGNNGGNGGG 
NGNNNNGAGG NGNNNGGNGG GNAGGGGGGN ANNGGGGGGG NGGGNNAGNA 
NGANGGAGNN NAGGGGNGNN GGGGNGGGAG GGGNANNNNN ANNNNGAGNG 
GGGGNGNGNG AGAGGGAAGN GAGNGNNGNN GNNGAGGA

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 7412960 [Map]; Strand: w
  - AT1G21160.1 - [+] show detail - eukaryotic translation initiation factor 2 (eIF-2) family protein
    Distance: -103; Region: promoter
  - AT1G21170.1 - [+] show detail - Exocyst complex component SEC5
    Distance: -90; Region: promoter
Flanking Genome Sequence: 13-1364-1 - 3-prime edge
```
CCCTTGAGCT AATCGCAGAG ATCTGTGCAG TTCTTATTTG AATTTAGTTT 
TGTGACTTTT TCCTTTGAAG AATTTTTCTT CTGTTTTCGA CTTTTTCCAA 
TTTCCATGTA TTAATGAAAT AAAAACTGGA GACTCACAAA ACGCAGTCGT 
TTGATTATTT TAACCTAAAA GTTATAAATT CTCCTTACTC AAGCT
```

AT1G21160.1

Model type: Protein coding
Short Description: eukaryotic translation initiation factor 2 (eIF-2) family protein
Computational Description: eukaryotic translation initiation factor 2 (eIF-2) family protein; FUNCTIONS IN: GTP binding, GTPase activity, translation initiation factor activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation initiation factor 2 related (InterPro:IPR015760), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 2 (eIF-2) family protein (TAIR:AT1G76810.1); Has 90488 Blast hits to 74140 proteins in 3758 species: Archae - 1026; Bacteria - 37280; Metazoa - 18910; Fungi - 5896; Plants - 2823; Viruses - 221; Other Eukaryotes - 24332 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G21170.1

Model type: Protein coding
Short Description: Exocyst complex component SEC5
Computational Description: SEC5B; BEST Arabidopsis thaliana protein match is: exocyst complex component sec5 (TAIR:AT1G76850.1); Has 822 Blast hits to 808 proteins in 207 species: Archae - 0; Bacteria - 24; Metazoa - 388; Fungi - 169; Plants - 124; Viruses - 8; Other Eukaryotes - 109 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G13550.1

Model type: Protein coding
Short Description: triglyceride lipases;triglyceride lipases
Computational Description: triglyceride lipases;triglyceride lipases; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G18640.1); Has 2190 Blast hits to 2187 proteins in 383 species: Archae - 0; Bacteria - 476; Metazoa - 135; Fungi - 440; Plants - 705; Viruses - 12; Other Eukaryotes - 422 (source: NCBI BLink).
Link: InterPro Scan - TAIR