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13-1421-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 2317786 [Map]; Strand: c
      • AT2G05980.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
      • AT2G05985.1 - [+] show detail - transposable element gene
        Distance: -486; Region: promoter
    Flanking Genome Sequence: 13-1421-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TGGTGGTATC ACCTTGTCGG AGACCTCCTG ATTTTCAACG ACCTCAGAAA 
    GTTGCAAAGT TGAGTTCTGT ATCTCAACAT TTGTATTCAC TTTGCTAACT 
    ATCACATTGT CAGACACAAC CGCTAGAACT TCACCTTCTT CTAATTCCAT 
    GACTCTCTCC TTCAATGGAG ACTTCGGCTT ACTCACACAA ACATCCACGA 
    GATGACCCCA TTTATTACAA CAAGAGCATT TAGGAGGCAA CCAAGGATAA 
    ACGAACTCCA CATTAACATC TTCTTCATCC TCTATACTGA ACCTGAAACA 
    CTTTGGAACC TCTTGCGAAA GATTAACTTC AACAAATACT TTTGCTTCAT 
    CAAACTTAGT GCATAACTCT GTTTCAGGAT GAAGTCTAAT TGGATTTCCC 
    ACTGGACTGG TAAGAAAGCT

AT2G05980.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 1.0e-42 P-value blast match to GB:NP_038607 L1 repeat, Tf subfamily, member 9 (LINE-element) (Mus musculus)
Link
InterPro Scan - TAIR

AT2G05985.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
hypothetical protein
Link
InterPro Scan - TAIR