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Mutant Lines
13-1450-1

13-1450-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 17903859 [Map]; Strand: w
- AT4G38160.3 - [+] show detail - Mitochondrial transcription termination factor family protein
  Distance: 0; Region: exon4 (CDS)
- AT4G38160.2 - [+] show detail - Mitochondrial transcription termination factor family protein
  Distance: 0; Region: exon3 (3UTR)
- AT4G38170.1 - [+] show detail - FAR1-related sequence 9
  Distance: -699; Region: promoter

NNGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
TACCCCGGGT AAAAAGCCCC TAGTCATTCC ACAAATATGG AGGCCCCTAG 
TCAAAGGTCA CATTTGATGA CAAAGAGATG GTTGATCGTT CTCTGCCTAT 
ATAGTATGTA CCTGTCATAT AAAAATGAGA CCCCCTCTGC TCTCTCTTTT 
GGATGAGATC AACCGTATTT TAAACCGGCC AAACTTGAAA GTTTTTTTTT 
GCTTCAAATG CTCTTTCAAG TANAGTCCCT TTTGTTATTC ACGTTTTGTA 
GCTATTCTAT TCTCTCTCCT TGGACTGGNG TTTTTGTTCT TCGGTTTTTC 
CGATCAAAGT TGAATCAANA ANAAGTTCGA TATGTCCGTC TTCGCTGTTT 
CTTGNGGTTG CTTGTNGGGC TTCTGTGCCT TTTTGATTTT TTCTATTTTG 
GGCCTGTGTG CCATGTTTTC GGCATTTCTG CTTTGTTGGG CCTACGTGCC 
TTTTCNAGCC TTGTAGTTTT NTTTGTTTAA AGCACTCAAT AATTGTTTGT 
TGACGGACCA AAAAACTCAA ATAGGCCCGA CTNAATTTAT TNTTTTAAGG 
GCCCAAAATT AAGGACTAGG CCTGCCTACC AGTCCCAACT CGNAACATNG 
GTTATGGTAA ACTAACAGCT TGCCGTTTTA TGTTNTAAAA ACGGCAGGAN 
AGTGTAGGCT TAAAATAGAC AAACCCGTCN CCAANCTNGG NGGATCACCA 
CCCCCGGGCC

3 prime edge [+] show sequence

Chromosome: 4; Position: 17903838 [Map]; Strand: w
- AT4G38160.3 - [+] show detail - Mitochondrial transcription termination factor family protein
  Distance: 0; Region: exon4 (CDS)
- AT4G38160.2 - [+] show detail - Mitochondrial transcription termination factor family protein
  Distance: 0; Region: exon3 (3UTR)
- AT4G38170.1 - [+] show detail - FAR1-related sequence 9
  Distance: -720; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
CATACTTCCG ACAAGCAGCT AGACTGCATT GCTGCATATT CTGTTCTGCA 
GTTAGGCTAA GCAGACACTT CTTTTGCTTG TCGGTTGCTG CAATAATCAC 
AAGCCAATAA TGACACTGAC TTATCCAACA ACATATACAT CCCATTTTGA 
TTGCAGTTGA ATACCTGAAA ACACAGGAAC CACTCTATGG ATATGCACNT 
TGATCGGGCC ATGGTGGTGG TTCTATCATA ATTAGGTAAT TTTCAAAAGG 
AAGTGTAGAA TCCATGATAA ACGAATGCAT AGTGAATAAT CGATGATATC 
TGGAAGAAAA CACTCTATTG ATATCACAAT CACTCAAGGT AAAGCTCGTG 
CTAGAAATTG GTGCACAAGC TGAAAACAGC TTACAGAGAG AGCCTGATGA 
AGGAAAAAAC TAGAGAGAGA TATAAAAGCT AGGAGCTTGC AGTTACCTCC 
GAAAAGCCAA ACTTCTCATG GAATTTCTTT GTGTTACAGT CCAGCATTTC 
TCTAAGGCTG CAGTCAATGT TGTTCTTTTT GACAAGTTTA AACCTCGATT 
CGACCTTCTT CTTCAATCCA TGGTGAAAGA ATT

AT4G38160.2

Model type: Protein coding
Short Description: Mitochondrial transcription termination factor family protein
Computational Description: pigment defective 191 (pde191); CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G21710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38160.3

Model type: Protein coding
Short Description: Mitochondrial transcription termination factor family protein
Computational Description: pigment defective 191 (pde191); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G21710.1).
Link: InterPro Scan - TAIR

AT4G38170.1

Model type: Protein coding
Short Description: FAR1-related sequence 9
Computational Description: FAR1-related sequence 9 (FRS9); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PMZ-type (InterPro:IPR006564), MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 5 (TAIR:AT4G38180.1); Has 1073 Blast hits to 1051 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 2; Plants - 1067; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR