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13-1503-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 532923 [Map]; Strand: c
      • AT4G01270.1 - [+] show detail - RING/U-box superfamily protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 13-1503-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TGCTCAGTTG CATCAATGCA ATGAGCAATT GAAGGAGGAT AAAGTGAAAA 
    GGTGGGAGGC TCTTCAAGAA ATATCAACGA CTCAGCATTT GCTTAAGTTA 
    AAATCTGAGG TTTGTTTAAA CTATACAACA TCCTTAGATT TTAGATCCTT 
    TTTGCTTCAC AGGCAGAATT TTGTGTTGAG TTTCCTAGTG TGTTTGTTTG 
    TTACAGGAAT GTATCCAGCT TAACTCACAG TGTGTTAAGC TACAGGAGAG 
    AACTATGGCT CTTGCCAAGG AGCTCGCATC GCTTAAATTG TAAGATAACA 
    TCTTTCATAT TGCTCTTTTA GTGTCTTCAG GTTCTAGTTT AATCATTCAC 
    TCTTTTGGTT AAACCTTTCT GAGTCTAATA TCTTGTTTTG CATCCAGGGT 
    TTCTGATTTA AGCT

AT4G01270.1

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Computational Description
RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01245.1); Has 5689 Blast hits to 5015 proteins in 477 species: Archae - 145; Bacteria - 387; Metazoa - 2946; Fungi - 366; Plants - 512; Viruses - 10; Other Eukaryotes - 1323 (source: NCBI BLink).
Link
InterPro Scan - TAIR