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13-1632-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1322083 [Map]; Strand: w
      • AT1G04710.1 - [+] show detail - peroxisomal 3-ketoacyl-CoA thiolase 4
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 13-1632-1 - 3-prime edge 
    GCCTTGAGAG TTATGGTTTC AGTAATAAAT TCGTAATCAC ATGCAAACAA 
    TTGAGAGCAA TTAGCGAGGG GAAATTGGAA ACAGAAGATT CGAAATCAAA 
    GCATCGGAAG AGCTTACAGA GAGAGAGGCG TCGGAAGATG ACGAAGGTTG 
    AAGATGACGA AGCAGTATCC TTTGTCTCTC CGTTGCTTTT TCCATTGTTT 
    TCGTTTGATT ATTTTGAAGC CCAAACTGGG CTAAACCGTT CGTTGTAAAG 
    CAGATAAAAG ACAAAGGAAA AAAAAANCTA ANCCGNTTCN TCCCGGTTTA 
    GGATGGGTTA CATNCNTNTN CGGTTTCAGG GTTTANCGGA ATCAATCNTC 
    TGGTTTTGAT GCTAANCNAC GTCGTNTANA GTAAAATGTN TTTNTTTNTN 
    TNTCAAAAAA ACTCNACAGT CNTTTNTTCN ACGGCNCNTT TNTNTTNTNA 
    ATTANCCCTA AAANCNCCGT NTTANTNTNT NTTCNANCCT ACTTTCAAAT 
    TCAAAACTTT CGTTCATNTG TTCTNTACGT AAGTCTTTGC TTTCTTCTTT 
    TCCCTGCNGN NGTNGTTNCT TTTNGGTTTT TCTTCTCAAT GTTTATGGAN 
    AATTTTTCGT TTTTGATTTC CATGGATTAT GAGTTGTTAC TTATTAAGTT 
    NGGNGCTTTG GTCTGTTCCT CATTGGCATA ATCTGGGATT AGNATCNCTA 
    ATCAATTGGA GNAATCNTTT ANTTNCTATG C

AT1G04710.1

Model type
Protein coding
Short Description
peroxisomal 3-ketoacyl-CoA thiolase 4
Curator Summary
EC2.3.1.16 thiolase.
Computational Description
peroxisomal 3-ketoacyl-CoA thiolase 4 (PKT4); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acetyl-CoA C-acyltransferase activity; INVOLVED IN: catechol catabolic process, ortho-cleavage, protocatechuate catabolic process, ortho-cleavage, metabolic process, fatty acid oxidation; LOCATED IN: peroxisome, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: peroxisomal 3-ketoacyl-CoA thiolase 3 (TAIR:AT2G33150.1); Has 22406 Blast hits to 22392 proteins in 2262 species: Archae - 405; Bacteria - 14105; Metazoa - 1004; Fungi - 662; Plants - 281; Viruses - 0; Other Eukaryotes - 5949 (source: NCBI BLink).
Link
InterPro Scan - TAIR