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13-1673-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2760502 [Map]; Strand: w
      • AT3G09035.1 - [+] show detail - Concanavalin A-like lectin family protein
        Distance: 155; Region: intergenic
      • AT3G09040.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
        Distance: 693; Region: intergenic
    Flanking Genome Sequence: 13-1673-1 - 3-prime edge 
    TACTTACTTA TAAGCGACAT AGAAGCAAGT GACAACTGAT GGACACATGT 
    GAATGCTGAG TTGTTTCTAG ACATTTCAAC TCTGTTCACG AGACTTTTTT 
    TATGTACTCA TTTCAGATTT CACATTCCTC TGTTGCAATA AAACACCAAA 
    GTGAGAAGAA GACAAAGTGG GTCCTGGTTC TTGACTCCGA TCCAGAAACA 
    GAAAATTGAT AAATGCACAG CTCATAATCC AAATGGATCA AGAACAACAT 
    GAACAACTAA GTTAATTTGC AACATATCAA TAAGCTTACA TCTTCTCACA 
    GTTTAGATTT TACATGTGAA AAGTCATTTC ACAAAACCTG CAACTAAGTA 
    AACAGACATA AGAATCACTA AAGAACGATC AAGTAAACAA GAGGGAAGAA 
    GAAGAAGAGA AAGTTCCTAA ATTTACACCA CAACACAAGA CAACTTTTCA 
    ACACCAAAAC CAAACTACTC ACTACTTCTT GCCTTGTTCA ATAGCACATT 
    CCTCTGGAAC CACGGCCATT GACCGCCTAA CACGGCATAT CGTCCAGAGA 
    TACAAACCCA GCAGTGCCCC TAAGGCTCCA CAAGCTGCAC CAAAGATCAA 
    AGCACCAAGC ATTTTCCGCG TACACTCACT TCTCCCTCGA CCATTTTCCT 
    CCTCCTTTGA AACTTCATTC GGTTCAAGCG GCACTGAATG CATCCACATC 
    GGAGGAGGAT GTCTTATTTC AAATCTCCAT GAATGGAGAA AATGT

AT3G09035.1

Model type
Protein coding
Short Description
Concanavalin A-like lectin family protein
Computational Description
Concanavalin A-like lectin family protein; FUNCTIONS IN: carbohydrate binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin family protein (TAIR:AT3G09190.1); Has 816 Blast hits to 814 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 813; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G09040.1

Model type
Protein coding
Short Description
Pentatricopeptide repeat (PPR) superfamily protein
Computational Description
Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1); Has 73401 Blast hits to 14698 proteins in 289 species: Archae - 0; Bacteria - 19; Metazoa - 251; Fungi - 280; Plants - 71776; Viruses - 0; Other Eukaryotes - 1075 (source: NCBI BLink).
Link
InterPro Scan - TAIR