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13-1726-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 15702347 [Map]; Strand: c
      • AT4G32540.1 - [+] show detail - Flavin-binding monooxygenase family protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 13-1726-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATGAC 
    TTGCCAAACA CTTACACACA TATAGTCATA TACATACCTA ATATTAGTGT 
    GTTGTCTTTT CTTATTGTTA AAAAATGAAG ATAATGGAAG GTGTAAAGGA 
    AATAACAAAG AAAGGAGCAA AGTTTATGGA TGGTCAAGAA AAGGACTTTG 
    ACTCTATCAT ATTTGCCACT GGTTACAAAA GCAACGTGCC TACTTGGCTT 
    CAGGTATGCA TTTGTATATG CAATTCACAT CTATATATAA TTCCCCACTC 
    AGAATTATTC AAAAACAAAA TTAACATCAA CGGCCTTTTC TATGATTATT 
    AGGGAGGTGA TTTTTTCACG GACGATGGGA TGCCGAAAAC GCCGTTTCCT 
    AACGGCTGGA GAGGAGGGAA AGGATTGTAC ACAGTTGGTT TTACGAGAAG 
    AGGACTCCTT GGAACGGCGT CTGACGCCGT TAAGATCGCT GGCGAAATTG 
    GTGACCAGTG GAGAGACGAA ATCAAGGGGT CCACTAGGAA TATGTGCAGT 
    TCTCGTTTTG TCTTTACCTC TAAATCCTAA TTTGCGTTTT TCACTTCTTT 
    TTTTGTTTGT TTAAAGTTAC CACCTAATTT TGCTTGTTGT AAATCGAAGT 
    AATAAACTTG TACAGATTTT CCTTAGGCNN ATTANAAGAT TGANAAAGCT 
    ACCANNCCGG GCCGNNNACC ACCCNNNNC

AT4G32540.1

Model type
Protein coding
Short Description
Flavin-binding monooxygenase family protein
Curator Summary
Mutant has elevated levels of free IAA in dominant mutant allele; Flavin Monooxygenase-Like Enzyme; Auxin Biosynthesis
Computational Description
YUCCA 1 (YUC1); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: in 7 processes; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT5G11320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR