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13-1759-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1381834 [Map]; Strand: w
      • AT1G04890.1 - [+] show detail - Protein of unknown function, DUF593
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 13-1759-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCG CTTNAACTTC TTTCTCCAAG AAANGTTTTT 
    CTCTCTCACG CCGTATCAAA ANGTCTTTGA GTATGACCAT CTCTTCAGCA 
    TCAAAAGTCG ATTTCTCTTC AACCAGTCTC TGGAACTGCC TCGCTTCCAT 
    TTCAATNGCC GCCTTCTCAT CTNGCAGCCT ATGTATCATC GCCATCGCTT 
    CATCCGCTGC TGATGCTGCA GCGCTTCTCT CTTTGTCAAG CTCGACACAA 
    ACCGTNGCTC GAGCCGCTCT CTCTTCTTTC AATAATTCTT CTAAATCCCT 
    AACANATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1381829 [Map]; Strand: w
      • AT1G04890.1 - [+] show detail - Protein of unknown function, DUF593
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 13-1759-1 - 3-prime edge 
    ANTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC 
    CTGTAGACAA CTACTCGAAG AAACAGAGGA ATTGGAATGT TCTTTAATAA 
    AAGAGAAGAA TGTTCCAGAA CCGGAACACA AACAAAACAA AGACTGTCAA 
    GAGAGAAGAG CTTTGCTCGT TCAGGAACTT GGTGGAACGG TTCTCGATAT 
    GCCTTATAGA GAAGAAGGAA ACAGAGATAA AAACAGAGAT C

AT1G04890.1

Model type
Protein coding
Short Description
Protein of unknown function, DUF593
Computational Description
CONTAINS InterPro DOMAIN/s: Intermediate filament protein, conserved site (InterPro:IPR018039), Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT4G13630.2); Has 7701 Blast hits to 5611 proteins in 507 species: Archae - 60; Bacteria - 425; Metazoa - 4500; Fungi - 427; Plants - 586; Viruses - 7; Other Eukaryotes - 1696 (source: NCBI BLink).
Link
InterPro Scan - TAIR