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13-1961-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 7950242 [Map]; Strand: c
      • AT4G13670.1 - [+] show detail - plastid transcriptionally active 5
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 13-1961-1 - 5-prime edge 
    CCGGTTTGTT CCTGCCAATG AGCCTGGAGG GATCTTCCCA TCTGTTTTCT 
    CCAAGAAGAA AAACCCGATT TTGAGTAACG TCAACCTTCT CTGTCACTTT 
    GATCTTTCAC GATTGATTGC TTCTTCTCAG GGACTTGTGT CACGGAAGTA 
    AATACCGCCC CATTACCAGC TTCCTTAATC AATGGAATTA AAAGAAAGAT 
    CCAGTATAAA GAACAAGTCT TAACAGGTTT ATTAAGCAAA TTAAGAGAAA 
    ATTCAGAATA TTCATGTTCC CTAAAACCTC AAACAAGACA ATGTAGTATT 
    TATCCCATTT ACCAATTGTA TTTCAGACTC ATATTAGACA CTTCAGATTC 
    CGAACAAAGC TCACTAGCAA CAGAAACATC ATCTTAGCTA ACAAGCT

AT4G13670.1

Model type
Protein coding
Short Description
plastid transcriptionally active 5
Computational Description
plastid transcriptionally active 5 (PTAC5); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, metabolic process; LOCATED IN: plastid chromosome, chloroplast thylakoid membrane, chloroplast, nucleoid, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan binding-like (InterPro:IPR002477), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305); Has 835 Blast hits to 827 proteins in 285 species: Archae - 9; Bacteria - 385; Metazoa - 155; Fungi - 28; Plants - 81; Viruses - 2; Other Eukaryotes - 175 (source: NCBI BLink).
Link
InterPro Scan - TAIR