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Mutant Lines
13-1981-1

13-1981-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 2; Position: 17955797 [Map]; Strand: w
  - AT2G43180.1 - [+] show detail - Phosphoenolpyruvate carboxylase family protein
    Distance: 0; Region: exon1 (5UTR)
  - AT2G43180.2 - [+] show detail - Phosphoenolpyruvate carboxylase family protein
    Distance: 0; Region: exon1 (5UTR)
  - AT2G43180.3 - [+] show detail - Phosphoenolpyruvate carboxylase family protein
    Distance: 0; Region: exon1 (5UTR)
  - AT2G43180.4 - [+] show detail - Phosphoenolpyruvate carboxylase family protein
    Distance: 0; Region: exon1 (5UTR)
  - AT2G43190.4 - [+] show detail - ribonuclease P family protein
    Distance: -187; Region: promoter
  - AT2G43190.1 - [+] show detail - ribonuclease P family protein
    Distance: -188; Region: promoter
  - AT2G43190.2 - [+] show detail - ribonuclease P family protein
    Distance: -192; Region: promoter
  - AT2G43190.3 - [+] show detail - ribonuclease P family protein
    Distance: -192; Region: promoter
Flanking Genome Sequence: 13-1981-1 - 5-prime edge
```
GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCT TCTGTTCGGT AAAAGAAAGA AACAGAAATT 
GATCAAAAGA AAGAAGTTGG ACAAACCGAA ACAACAAGAA CCAGACCGAA 
CCAGATTTAA TAATTAAAAA AAAAAAAACC CTNNNCCCGG GGNCCTTTTT 
NGGGGNCCCC GGGNNNNTTT TTTTTNGNNA AAANNNANNG GGGGGCNTTA 
AAAANNNNAN TTTTTTTTTT CCCNCCTTTT TNACCNNCCC CGGNANTNGN 
GGGNNNNANT TTNCCCNCCC NTTTTNNNTN CGCNNNCCCG AANCCNTTTT 
TTNNGTTNNN NGTTTTTNGT NNAAANNTTT NGGGNNGGNN GGGGGTTTNC 
CCTTGGGNNA NNAAANGCTC CCNCCCGGGN CNGNNANCCC CCCNGGCCCT 
TANNGG
```
3 prime edge [+] show sequence
1. Chromosome: 2; Position: 17955796 [Map]; Strand: w
  - AT2G43180.1 - [+] show detail - Phosphoenolpyruvate carboxylase family protein
    Distance: 0; Region: exon1 (5UTR)
  - AT2G43180.2 - [+] show detail - Phosphoenolpyruvate carboxylase family protein
    Distance: 0; Region: exon1 (5UTR)
  - AT2G43180.3 - [+] show detail - Phosphoenolpyruvate carboxylase family protein
    Distance: 0; Region: exon1 (5UTR)
  - AT2G43180.4 - [+] show detail - Phosphoenolpyruvate carboxylase family protein
    Distance: 0; Region: exon1 (5UTR)
  - AT2G43190.4 - [+] show detail - ribonuclease P family protein
    Distance: -188; Region: promoter
  - AT2G43190.1 - [+] show detail - ribonuclease P family protein
    Distance: -189; Region: promoter
  - AT2G43190.2 - [+] show detail - ribonuclease P family protein
    Distance: -193; Region: promoter
  - AT2G43190.3 - [+] show detail - ribonuclease P family protein
    Distance: -193; Region: promoter
Flanking Genome Sequence: 13-1981-1 - 3-prime edge
```
AATTGAAAAC GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTAACACT 
GAGTGTGAAT CCTTCAAGGC TTCAATGGCG GCACTTAGCT TTTGCAGCTC 
TTCTCCTCCT CGAATT
```

AT2G43180.1

Model type: Protein coding
Short Description: Phosphoenolpyruvate carboxylase family protein
Computational Description: Phosphoenolpyruvate carboxylase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Isocitrate lyase/phosphorylmutase (InterPro:IPR000918); BEST Arabidopsis thaliana protein match is: Phosphoenolpyruvate carboxylase family protein (TAIR:AT1G77060.1); Has 5459 Blast hits to 5459 proteins in 1102 species: Archae - 78; Bacteria - 2773; Metazoa - 20; Fungi - 198; Plants - 102; Viruses - 0; Other Eukaryotes - 2288 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G43180.2

Model type: Protein coding
Short Description: Phosphoenolpyruvate carboxylase family protein
Computational Description: Phosphoenolpyruvate carboxylase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Isocitrate lyase/phosphorylmutase (InterPro:IPR000918); BEST Arabidopsis thaliana protein match is: Phosphoenolpyruvate carboxylase family protein (TAIR:AT1G77060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G43180.3

Model type: Protein coding
Short Description: Phosphoenolpyruvate carboxylase family protein
Computational Description: Phosphoenolpyruvate carboxylase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Isocitrate lyase/phosphorylmutase (InterPro:IPR000918); BEST Arabidopsis thaliana protein match is: Phosphoenolpyruvate carboxylase family protein (TAIR:AT1G77060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G43180.4

Model type: Protein coding
Short Description: Phosphoenolpyruvate carboxylase family protein
Computational Description: Phosphoenolpyruvate carboxylase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Isocitrate lyase/phosphorylmutase (InterPro:IPR000918); BEST Arabidopsis thaliana protein match is: Phosphoenolpyruvate carboxylase family protein (TAIR:AT1G77060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G43190.1

Model type: Protein coding
Short Description: ribonuclease P family protein
Computational Description: ribonuclease P family protein; FUNCTIONS IN: ribonuclease activity, ribonuclease P activity, RNA binding; INVOLVED IN: tRNA processing, mRNA cleavage, rRNA processing; LOCATED IN: ribonuclease P complex, nucleolar ribonuclease P complex, ribonuclease MRP complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease P/MRP, subunit p29, eukaryotic/archaeal (InterPro:IPR002730), Ribonuclease P/MRP, p29 subunit, eukaryotic (InterPro:IPR016848); Has 293 Blast hits to 293 proteins in 155 species: Archae - 0; Bacteria - 0; Metazoa - 120; Fungi - 100; Plants - 34; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G43190.2

Model type: Protein coding
Short Description: ribonuclease P family protein
Computational Description: ribonuclease P family protein; FUNCTIONS IN: ribonuclease activity, ribonuclease P activity, RNA binding; INVOLVED IN: tRNA processing, mRNA cleavage, rRNA processing; LOCATED IN: ribonuclease P complex, nucleolar ribonuclease P complex, ribonuclease MRP complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease P/MRP, subunit p29, eukaryotic/archaeal (InterPro:IPR002730), Ribonuclease P/MRP, p29 subunit, eukaryotic (InterPro:IPR016848); Has 287 Blast hits to 287 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 118; Fungi - 100; Plants - 32; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G43190.3

Model type: Protein coding
Short Description: ribonuclease P family protein
Computational Description: ribonuclease P family protein; FUNCTIONS IN: ribonuclease activity, ribonuclease P activity, RNA binding; INVOLVED IN: tRNA processing, mRNA cleavage, rRNA processing; LOCATED IN: ribonuclease P complex, nucleolar ribonuclease P complex, ribonuclease MRP complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease P/MRP, subunit p29, eukaryotic/archaeal (InterPro:IPR002730), Ribonuclease P/MRP, p29 subunit, eukaryotic (InterPro:IPR016848); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G43190.4

Model type: Protein coding
Short Description: ribonuclease P family protein
Computational Description: ribonuclease P family protein; FUNCTIONS IN: ribonuclease activity, ribonuclease P activity, RNA binding; INVOLVED IN: tRNA processing, mRNA cleavage, rRNA processing; LOCATED IN: ribonuclease P complex, nucleolar ribonuclease P complex, ribonuclease MRP complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease P/MRP, subunit p29, eukaryotic/archaeal (InterPro:IPR002730), Ribonuclease P/MRP, p29 subunit, eukaryotic (InterPro:IPR016848).
Link: InterPro Scan - TAIR