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13-2009-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 10687454 [Map]; Strand: c
      • AT4G19640.1 - [+] show detail - Ras-related small GTP-binding family protein
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: 13-2009-1 - 5-prime edge 
    AGTACAGCCA ACAGAAAACC CAACAGGAAT GGTTCTGCCA GACAGGGCCA 
    TGGATAGGGC AGTGAGCTCA TCTTGTTGTG CTTAGTTATA TTGTGTAATG 
    GCACACACCT TCTCTTAAAA AGAGATCTTT TGGTCACTTT GAAGTTATGG 
    ACTTCTGTGT TTGCGTCTCT TTGCTTTGTT TTACGTATTT GAGATTTGAT 
    CTCCACTATT TTGTAAATAA ATCTAATACT CAACTAAGTA ACTAAGTGCG 
    TGAGGGGGCT ATGGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 10687570 [Map]; Strand: c
      • AT4G19640.1 - [+] show detail - Ras-related small GTP-binding family protein
        Distance: 0; Region: intron6 (CDS)
    Flanking Genome Sequence: 13-2009-1 - 3-prime edge 
    GCTGTACTCG CGGTAGCCTT CTTGCTGTAC CAGCCAAAAG AATAAGTATG 
    ATAGGGTTTA ATATACGAGA GACAAAAATT GTGTGAACTG GTTATCAAAG 
    TGTAAGGAAA GCTCACCGAT TTCATAGAAT ATCTCTTTGA CATTAGTAGC 
    GGTTTTTGCT GAAGTTTCCA TGAAGAAAAG ACCGTTTTCC TGAGCATATG 
    TTTGTGCATC CTGCAAAGGA TCAAGAGTGT GAGATATCAT CAGGAAATAC 
    GTGAATCAGT GAGATTCAGA AGCAAAGTTA AAGGGTGCGC ACATTGTCTA 
    TGTATATAAT GTCTACTTCA TTAGAGATGC ATATCTCTGA CACACAACAG 
    AACTGTGTTT TTCTGTCCTT TGCAAGTCAC AACTGAACTT TAATGCACAA 
    CGTAAATGAT TCTAACAGAT ACTTCAAAAG GATCAGTCTT GAGAAATGCT 
    ACTTATCTAA AATCTAGGCT TTTGGCATAA GACAGTAAAA TATGGACTTG 
    CGGGATAAGA AAGGTCATAT GAAAACATAT ATATCATTCT CCAAAGCTGG 
    TTAGAGAAAA CTGCACTATA CTTCTTAATG AAACATTAAC TGTCTATACA 
    ACAAGCCTAA TTTATGATTT GTTAAGTGTG TGGGGTCGGT TTAGGTGGCT 
    TGGTTTGTCA GGTTAATGTC AATAAGGTAN ATTGNATTTT ACNACAAANA 
    NATATCACCT AATGTTCTGA CTCCTGTCAA CGTGACTGTG AAATTCAAAT 
    ACANCTTANA CNTTCA

AT4G19640.1

Model type
Protein coding
Short Description
Ras-related small GTP-binding family protein
Curator Summary
Encodes Ara7.
Computational Description
ARA7; FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: endosome, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab5-related (InterPro:IPR015599); BEST Arabidopsis thaliana protein match is: RAB homolog 1 (TAIR:AT5G45130.1); Has 26416 Blast hits to 26384 proteins in 719 species: Archae - 27; Bacteria - 133; Metazoa - 13862; Fungi - 3690; Plants - 2969; Viruses - 20; Other Eukaryotes - 5715 (source: NCBI BLink).
Link
InterPro Scan - TAIR