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13-2019-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 18733899 [Map]; Strand: c
      • AT3G50480.1 - [+] show detail - homolog of RPW8 4
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 13-2019-1 - 5-prime edge 
    ATCGTCCCAT TGATCAACTT GAAAATCCAC AACTATTATG CTTCTTAATG 
    CAAGTTCTAT CGTTTCGATT GCTTTGATGT ACCTAAAGAT AAACAGAACA 
    AACATAATAC ACGTGTTATT TTTCCACAAC ATGATAGGTT TTGTACGTTT 
    AGTGTTTGGA GATTATGGAA ATCATGTAAA AAAAAATTGT TACAAAGAAN 
    AAGATATTTT TCTCTAAACC ATTAAACTAA GAAATTAAGC GATCCAAAAA 
    CCAATAGAAA TTCATGTCAT ATATACGAAC CTGTACTTCC TGAGTACTTG 
    TCTGCGTCTG AGTTTCGGAT AAGCCTCAAC TAAAACATAA GCTAATTCAA 
    GGAAACACGT GANACGTTCG TTGACTTCCC TTAATGGTGA ACCTTCCACT 
    TTACTCCGCT TATCGATTTG AACCAACAAC GGCCTGATAC TAATGATTGT 
    AGCGCANAGA CGGTTTACNA CAGATATATC TCTTGCTTTT CTGAAGCGGT 
    CGTAAATGGC TTGGGCTCCA ACTCCAAGAA CAGCCCCTAT CGCAAGCTCA 
    CCAATCGGCA TTTTTTGAAA GTAGTTGTTT AGCTCTCGA

AT3G50480.1

Model type
Protein coding
Short Description
homolog of RPW8 4
Curator Summary
Homolog of RPW8
Computational Description
homolog of RPW8 4 (HR4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Powdery mildew resistance protein, RPW8 domain (InterPro:IPR008808); BEST Arabidopsis thaliana protein match is: homolog of RPW8 3 (TAIR:AT3G50470.1); Has 106 Blast hits to 90 proteins in 15 species: Archae - 14; Bacteria - 4; Metazoa - 2; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Link
InterPro Scan - TAIR