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Mutant Lines
13-2026-1

13-2026-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 4162005 [Map]; Strand: c
- AT1G12250.2 - [+] show detail - Pentapeptide repeat-containing protein
  Distance: 550; Region: intergenic
- AT1G12260.1 - [+] show detail - NAC 007
  Distance: 827; Region: intergenic

GTNATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCTT GGATATAATC CAAATTTTCT TTTATTACCG 
GCGGCTATAA CAAACAATTA ATTACGCTTT CGAAAAGTTA ATTAACATTG 
TCACAATTTA ATCACCAATA TTCGATACCG ACNTTGAAAC CTGAGTAATA 
TTAGGGAGTT CTGAAGCATA TTATTAATAT GACACAGTAG CATGTGACGT 
ATAATCATTA GTTTGTTTCT ACTTTTTGTA TAAGCCACTA CCACAAATCC 
CAAGACCATA ATATATTTTG AAACTGTAAT GATTATTTAA CTAATGTTGA 
AGTAATTATT TGTTCAATTG CCAAAACTTA TTGCATTTGG TAAGTATCAT 
AAACCCAAAT GTGACTTGTT GCAAACAAAT TTAGATTAAG ATTTTGGTTT 
TTATTTGCAA GCATAATTTT TTTAAATTTT CATAGGGATA TTAAATTGCT 
AAGGGCATAT TTTTTAGAAT GCTATTATGA TTTATGTGGT CTAAAAAGTA 
ATCAATCACA TTATTTAAAA TGCTAGGGGA CAACCTAGTA GAGTTAAACA 
GGCTTTTACA CCTTTTGATT GTCTTAGAGA CAAAACTGAT CATTATCTCC 
TCTTTTTCAG AGTTATCTTT TTGNCCTTTT TCTTTCTCCA GNCATTTACA 
ATTCAATACT CCTATNAACA TACATCACAT GATTAGTGGT TTCNCAACAT 
ATAAAGATAC AAATTCTATA TCTGNATTGA ATCACACATG ATACATAACA 
TCTTGAACTA CTT

3 prime edge [+] show sequence

Chromosome: 1; Position: 4162001 [Map]; Strand: c
- AT1G12250.2 - [+] show detail - Pentapeptide repeat-containing protein
  Distance: 546; Region: intergenic
- AT1G12260.1 - [+] show detail - NAC 007
  Distance: 831; Region: intergenic

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
TGATATCCAA GCTCCTCTGG ACCTTGTTTG CCAAACCCAA AGAGCACGCC 
CTAATCATGA TGTTCCTTGC ACCAAATTAA TTGCGGACGA ATTTTTTTCT 
AAATATAATT GAGAAGAAAA ATCCCAAATT ATATTTCAAT TTTTTTTTGN 
GTTGATGATC AATCAACTCC GATCCAGGAG TGGCCCAAAT CAATATATCC 
GCATAATGAA CAGAATTTAG TCGTCTAAGT TAATTCATCT TTGAGTAATC 
ACAATTTATA TTCCTTAATT GCAGTAANAA TTTTTTTTTT AGTTTTTTTT 
TNTNTCCAAG TAAATTAAAA TNTNCGGNTT TTTTTTGGGC CNNCTTTGAN 
TCAANCCCAN TATTTNCAAA ATTNTTCCNN AAANGCTTNA NCTTNTTTTT 
TCNNGNGAAT AAAAAAATAA CCCCCGTAAA ANNGGTTTTT TTTTTTTTTT 
CCACGGNTNG TNTTTNTNTA ANAANAGTNT NGACNCGNGT TTGTTTNTCC 
TTNAAGCCAN ATTNTTNNAA TTNTTTCNAA TNCCCTATTN NGGGGTANAC 
ATCCTTTTAA AGCTACNANC CCGGGCCGGG GACCACCGGG NNNNNTTNAA 
A

AT1G12250.2

Model type: Protein coding
Short Description: Pentapeptide repeat-containing protein
Computational Description: Pentapeptide repeat-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentapeptide repeat (InterPro:IPR001646); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G44920.2); Has 7775 Blast hits to 4220 proteins in 505 species: Archae - 143; Bacteria - 5794; Metazoa - 1; Fungi - 0; Plants - 235; Viruses - 4; Other Eukaryotes - 1598 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G12260.1

Model type: Protein coding
Short Description: NAC 007
Curator Summary: Encodes a NAC-domain transcription factor. Expressed in the vascular tissue.
Computational Description: NAC 007 (NAC007); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: Arabidopsis NAC domain containing protein 26 (TAIR:AT1G62700.1); Has 3158 Blast hits to 3153 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 15; Fungi - 2; Plants - 3027; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).
Link: InterPro Scan - TAIR