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13-2066-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2677388 [Map]; Strand: w
      • AT1G08465.1 - [+] show detail - Plant-specific transcription factor YABBY family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 13-2066-1 - 5-prime edge 
    CGTTATACTA CATATACATA AATAATGGAG ATGTCGCACG AGTCTGATTA 
    GGAACAAAAA GGGCCATATT TAATAAAAAT GTTAGAGGTC TTCTTGCACA 
    AAATAGGGTG TGTATTGTAG TGGAAAGTAC AAAAGATTTG TTCTACCCAG 
    TTCCAGCAAC AATTTCTTGA TCTATACAAA AGCTGCAAAC TGTTAAATCA 
    TGGCCGATCC TTGACCACTT AGGATTGGAT CACCAGC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2677272 [Map]; Strand: w
      • AT1G08465.1 - [+] show detail - Plant-specific transcription factor YABBY family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 13-2066-1 - 3-prime edge 
    GTATAACGTT TATGAATAAT ATCAGTGTAC AAGAGTTTCT CATGATAAAC 
    TTTTTTTTTT TTAATTNGNN TAANCCCTAA NCCNTTAANC TNCNNANCCT 
    ACCTNGTNAG TTNCNNANNA TNCCTTANTT NTTNGGATNA TAAATNAANA 
    NTTTNTTTCC CCCCCCNTNT ANANNNNCNT TTTTCNCNGN TCCCCCCNTT 
    TNAAAANNGT CCGGAAAANC NGGGGNTTTT NTNAAANGNC CCNNAAANCC 
    GTTAAANAAA NCNGGNNANA NTTAGGGAAG TTTTAAGNAA ATTTNAAAAN 
    CNTNTCCNNG TAANAAAANA NCTNCNCCCC CCNGNAAAAN CNTAAAAGGG 
    ANTTTNGGAA ANCCCAAAAN NGATTTNAAA ANANNCNNNG GGGGNNGGGA 
    NGNAAANNTT TTTACTTNNN CCCNCGGGCC CCNTANAA

AT1G08465.1

Model type
Protein coding
Short Description
Plant-specific transcription factor YABBY family protein
Curator Summary
Member of the YABBY family of Arabidopsis proteins involved in the abaxial cell fate specification in lateral organs
Computational Description
YABBY2 (YAB2); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: plant-specific transcription factor YABBY family protein (TAIR:AT2G26580.2); Has 446 Blast hits to 444 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 433; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Link
InterPro Scan - TAIR