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13-2146-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5902667 [Map]; Strand: c
      • AT1G17255.1 - [+] show detail - other RNA
        Distance: 0; Region: exon5 (NonCoding)
      • AT1G17250.1 - [+] show detail - receptor like protein 3
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-2146-1 - 5-prime edge 
    CNTGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCC GCAGGCTTCA ACAATATCTC TGGTGAAATC 
    CCAAGTGACA TATACAATCT TTCGGAGCTC GAGCAACTCT TTCTACCCGT 
    CAATCATCTT TCTGGAAAGA TCAATGATGA CATCACCCAC CTCACAAAAC 
    TAAAATCGCT CGAGCTGTAC TCCAATCACC TTGGAGGAGA AATACCAATG 
    GACATAGGTC AGCTCTCTCG CCTGCAAAGC CTCCAACTCC ATATCAATAA 
    CATCACTGGT ACAGTCCCGC CTTCTCTTGC AAATTGTACT AATCTCGTCA 
    AGTTGAATCT GAGGCTTAAT CGGCTGGAAG GAACCTTATC AGAGCTTGAC 
    TTTTCCCGCT TTCAGAGCCT TAGCATTCTA GATCTCGGAA ACAATAGCTT 
    CAGCGGTGAT TTCCCTTGGA GGGTTCACTC CTGCAAATCT CTATCAGCGA 
    TGAGATTTGC AAGCAATAAG TTAACAGGAC AGATATCTCC TCACGTACTG 
    GAACTTGAAT CTCTATCGAT CTTGTCTCTT TCAGACAATA AACTGATGAA 
    CATTACAGGC GCTCTTGGAA TT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5902721 [Map]; Strand: c
      • AT1G17255.1 - [+] show detail - other RNA
        Distance: 0; Region: exon5 (NonCoding)
      • AT1G17250.1 - [+] show detail - receptor like protein 3
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-2146-1 - 3-prime edge 
    ATGTAGAACA CTTAGCTTCA AACATCTCCC TAGTCCTTGC GGAATATTAC 
    CGGTAAAATC ATTGTAGGAG AAATCCAGTT TGCTGAGCTG CGGTGAACTC 
    TTGCACATAA ACGAAGGGAT TGAGCCTGTG AAGCNTGTTC TTGCTTGACA 
    TTGAAACNTG ATTAAATCGA AAGTTCCTTG CATAAAAATA GAACTAGGGA 
    GGATTTCGCC TTGGAGAAAA TTGCTTGACA GATCAACTAT CCGAATTGGG 
    AAACATCTGT TGCTTCCATT TCTAAATGTT TGTTCAACTG GCAACTCACC 
    ATCGAGGCTG TTGTAACTAA GATCAAGAAC TTTGAGCTGA TCAAGGGCTG 
    AGAGAAAGCC AGATGGGAGA TGACCGGAGA GACGGTTATG AGAAAGATTG 
    AGTTGAGAGA GATGGTGGAG ACGCAGAACA GACAAAGGGA GTTTACCATA 
    TAGTGCTCTA AAGGGCAATG AGATTGCAGT GATGTGGCTA TCCGGGGAAT 
    CATCGCAGGT TATTCCTTCC CATGAGCAAC AATCAATGGA TGGGTTCCAA 
    TTCAGAGGAG AAACAGAAGA AGAAACGTTT CCAGAGAACC ACAGTAGGGA 
    TTCTCGATCT TGCGAGTTGC AGAGAGCCTC TGAAACTGCA ATAGAAAGGA 
    CACTGATGAA AAGAACACAC TGAAGGAGTA TGCCAATCAT GTGAAAACTC 
    AGAGCTTGTA TTGGTCTTGT GGTTGATGAA GTTCTCACAA AACCTTTGGC 
    TTTGAATCTN CCCTCATTAG N

AT1G17250.1

Model type
Protein coding
Short Description
receptor like protein 3
Computational Description
receptor like protein 3 (RLP3); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 2 (TAIR:AT1G17240.1); Has 81484 Blast hits to 24794 proteins in 958 species: Archae - 37; Bacteria - 4331; Metazoa - 15807; Fungi - 760; Plants - 53957; Viruses - 2; Other Eukaryotes - 6590 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G17255.1

Model type
Other RNA
Short Description
other RNA
Curator Summary
Potential natural antisense gene, locus overlaps with AT1G17250
Link
InterPro Scan - TAIR