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13-2290-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 19798134 [Map]; Strand: w
      • AT1G53130.1 - [+] show detail - Stigma-specific Stig1 family protein
        Distance: -2590; Region: intergenic
      • AT1G53140.1 - [+] show detail - Dynamin related protein 5A
        Distance: -1104; Region: intergenic
    Flanking Genome Sequence: 13-2290-1 - 5-prime edge 
    GTTCGAATAT AGTTGAATCA AGAACCGATT TGGAATATCT TTTTTCTCTG 
    ATTCTAAAAT ACTTGATCGA ATAACCAAAT AACTAAAAAA TCTAGTTGAG 
    ACTCTGTTTG GTTCCATTCG ACGTTGTTGT TTTTCGGTTC TTGAGTATTT 
    ACCCAGGATG GATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 19798059 [Map]; Strand: w
      • AT1G53130.1 - [+] show detail - Stigma-specific Stig1 family protein
        Distance: -2515; Region: intergenic
      • AT1G53140.1 - [+] show detail - Dynamin related protein 5A
        Distance: -1179; Region: intergenic
    Flanking Genome Sequence: 13-2290-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCA 
    TGCCTAAACT GAATGGTATT CGAACCAGAA CCGAATCAAA ATTCTTTTGA 
    TTTCTATACT GAAGCTAAAG TTGAGATCTT AACAAAACCA AAACCGGACC 
    AAAATTTATT TGGTTTCTAT ATGGATC

AT1G53130.1

Model type
Protein coding
Short Description
Stigma-specific Stig1 family protein
Curator Summary
Encodes GRIM REAPER (GRI), involved in the regulation of cell death induced by extracellular ROS (reactive oxygen species). Secreted into the extracellular space.
Computational Description
GRIM REAPER (GRI); CONTAINS InterPro DOMAIN/s: Stigma-specific protein Stig1 (InterPro:IPR006969); BEST Arabidopsis thaliana protein match is: Stigma-specific Stig1 family protein (TAIR:AT4G26880.1); Has 276 Blast hits to 191 proteins in 30 species: Archae - 0; Bacteria - 84; Metazoa - 0; Fungi - 32; Plants - 157; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G53140.1

Model type
Protein coding
Short Description
Dynamin related protein 5A
Curator Summary
Encodes DRP5A, a dynamin protein involved in cytokinesis in Arabidopsis.
Computational Description
Dynamin related protein 5A (DRP5A); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: cytokinesis; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin, GTPase domain (InterPro:IPR001401); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G19720.1); Has 2347 Blast hits to 2342 proteins in 280 species: Archae - 0; Bacteria - 0; Metazoa - 1001; Fungi - 589; Plants - 464; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink).
Link
InterPro Scan - TAIR