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Mutant Lines
13-2340-1

13-2340-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 144094 [Map]; Strand: c
- AT2G01275.1 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
  Distance: 0; Region: intron1 (5UTR)
- AT2G01275.2 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
  Distance: 0; Region: intron1 (5UTR)

CNTGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
TCCCATCCTA CTTTCATCCC GNTTTTGNGT TCTGGTCACC AACCANGTTN 
GGTCTCAGCT TTACCTAAAC CACCATCTAT CATTAGCTCT TTCAATTAAC 
TCCACAAATT AAACTTCTTT AGCTTATTTT AAGTCGCCTT GATCTCATCA 
ATGTTTCAAA CTTTTTCTTC ATTAATTCGC ATCTTCTAAT TCACATGTTC 
ATGTTGCGTA TGGAATCTCC TTAGCATTAA ATGCAAATTC TGACCCCAAC 
CCATTATTTA TCATTTCTTC AGCTGCACGT TTCTTTCTAT ACCGTGAGAA 
CAGAGAACAT GGGAGATCAT TTCGTGCTGC TGGTGGATCG GTTGATAACA 
GAATCCACGA TTGAGGCTGC GATTCAGAGC AGGAACCAGA TGTTGCAAGC 
TAATATACCC GTTGAGGAAT GTACAATCTT GGACGATAAA ACACTTGAGA 
TGCTGCGTAA CGGAGATTTG TCAATGGCTG AGTGCAGGAT CTGTCACGAC 
GAGGACTTGG ATTCCAACAT GGAGACTCCT TGTTCTTGCA GCGGCAGCGT 
CAAGGTAAAC ACAATTAGAA ACATTTTTCC CAAGTTAAGA GAACATTGGT 
TGGATCGGAT GATCAATGTT GTTGGTTTAA CTTNGGCAGT ATGCGCATAG 
GAGGTGCGTA CAGAGATGGT GTACCGAGAA AGGTGATACC ACCTGCGANA 
TTTGCCATCA GGTTNGGCTC CNCTCTTTTT TTTTTTNTTN TTTTN

3 prime edge [+] show sequence

Chromosome: 2; Position: 144152 [Map]; Strand: c
- AT2G01275.1 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
  Distance: 0; Region: intron1 (5UTR)
- AT2G01275.2 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
  Distance: 0; Region: intron1 (5UTR)

TAAACTAAAT ATGTTTCTTA TTGTTTGACC AAACTAACTG CACAAAAGTT 
TATCAAAACG GTTTAGTGGA ATTTTGCACC CAAAAAAAGA AAATTAAATC 
TAAGAATCTG TATTTACCGT AGTCGAATCG TCTATGTAAG GGTTTTCATA 
ATTTGCAATA AATAATAAAT TTAAGACGGC AAAACAAATT AGAGAAAGTT 
TTGAATGAAT GAAGAATACA CTTGAGACAA AACATAAGAC AACCGAAAAG 
AGAGGGAGAA TCGAGAGGCA GACCCAAAAT TTAGGAGATG GAGGAGCAAA 
AGAGCTTTGT ACCGTTTTCT TCTGCTTTTG AAAGAAAGAA AGAAGAAGAA 
GAAGAAGTGG AAAAGCGAAG AAAAAGGAGA CTTAGAAGAA GAGAATCGTA 
TTTAGTTTAT TCTGACGCTA AAGCCTTAAC AAAAGCT

AT2G01275.1

Model type: Protein coding
Short Description: RING/FYVE/PHD zinc finger superfamily protein
Computational Description: RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G38070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01275.2

Model type: Protein coding
Short Description: RING/FYVE/PHD zinc finger superfamily protein
Computational Description: RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G38070.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR