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13-2380-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
seedling (PO:0008037)
  • desaturated green (PATO:0001272)
    (Seedling::pale green)

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2349350 [Map]; Strand: w
      • AT1G07630.1 - [+] show detail - pol-like 5
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-2380-1 - 5-prime edge 
    GNGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCGACTCTA ATCAGTTCCT CAAAAGTCCA TTCAGAGGAA GACACAACGA 
    CGACAACGTT CCGTACAATC TCCGGCGCTT CCGTTAGCGC CAACACAGCT 
    ACTCCTCTCT CAACTTCTCT CTACGATCCC TACGGTCACA TCGACCGCGC 
    CGCCGCATTC GAAAGCACGA CTTCATTTTC GTCAATCCCT CTTCAACCGA 
    TCCCCAAAAG CTCCGGTCCG ATCGTTTTAG GCTCGGGTCC GATCGAAAGA 
    GGGTTCCTTT CAGGTCCGAT CGAAAGAGGA TTCATGTCGG GTCCTCTTGA 
    TCGGGTCGGG TTATTCTCAG GTCCGCTTGA TAAGCCAAAC TCAGATCATC 
    ATCATCAGTT CCAACGTAGC TTCTCTCATG GTTTAGCTTT ACGGGTCGGG 
    TCAAGAAAAC GATCTTTGGT TCGGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2349273 [Map]; Strand: w
      • AT1G07630.1 - [+] show detail - pol-like 5
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-2380-1 - 3-prime edge 
    GGTCGGACGT AGCAGAAGGA GTGACCTAAA CCTTCGTCTA AAGGATC

AT1G07630.1

Model type
Protein coding
Short Description
pol-like 5
Curator Summary
Encodes a protein phosphatase 2C like gene, similar to POL. Involved in leaf development. Knockout mutants have abnormally shaped leaves.
Computational Description
pol-like 5 (PLL5); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation, leaf development; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: poltergeist like 4 (TAIR:AT2G28890.1); Has 2889 Blast hits to 2855 proteins in 251 species: Archae - 0; Bacteria - 18; Metazoa - 486; Fungi - 220; Plants - 1762; Viruses - 0; Other Eukaryotes - 403 (source: NCBI BLink).
Link
InterPro Scan - TAIR