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13-2385-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3791130 [Map]; Strand: w
      • AT1G11280.1 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: -318; Region: promoter
      • AT1G11280.2 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: -254; Region: promoter
      • AT1G11280.3 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: -254; Region: promoter
      • AT1G11280.4 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: -318; Region: promoter
    Flanking Genome Sequence: 13-2385-1 - 5-prime edge
    ACATNAACCC TGTCCANAAT AACGCCTTTG NCNCACACTA CATAACATAT 
    CTTAAGTGAT TTGAATTTTT CTATNNNTGT ACTCTCTGTA NCAAGAAATA
    ATTNTTNTTC CNNTANCAAT NNCACAACAA CACTGNTTCA GCTTTCATAT
    GTACTTGGGA AAGAAAGGAA AAACAGAGCT GCAAAAATGA ATAAATTNTT
    ACTTGGACGC TTGCAAACGA GACTTCGCTC ACATATTGTA GCTCTCTATT
    CGTAGTGATC AGGCTTAAAC CTTGTTTATG ATACAGCAAA TTGTAGCTCT
    CTACAAAGGC TTCTACTTCA GACCAGGTCT TGTTATTCCT CAAATTAGTT
    TTCTCTCCCG GATATATAAT GCTCATCAAT GTTTTCGGTG GAGGGTCATG
    TC
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3791014 [Map]; Strand: w
      • AT1G11280.1 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: -202; Region: promoter
      • AT1G11280.2 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: -138; Region: promoter
      • AT1G11280.3 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: -138; Region: promoter
      • AT1G11280.4 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: -202; Region: promoter
    Flanking Genome Sequence: 13-2385-1 - 3-prime edge
    GTTGATGTAA GATGGAGTTT TTAAATTAGA ATAAAGTATT ACAAATTTTT 
    TATATGGTAA CACACCTAAG GACAAGATTG CATCTTCTTC ATCATTTCGG
    TTTATTATAA TGCCTATTCA AAGAACGAGG TGTCAAATAT AAAACAATGC
    TATATCTTAT GGGTAATAAC ATTATACGAT ACATCTAGAG GAGTCATTGT
    TTTCAGTTTT TCAAAACAAA ATTTTATTCA TACATTCAGA TC

AT1G11280.1

Model type
Protein coding
Short Description
S-locus lectin protein kinase family protein
Computational Description
S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61480.1); Has 119990 Blast hits to 118206 proteins in 4416 species: Archae - 104; Bacteria - 13409; Metazoa - 44077; Fungi - 9917; Plants - 34701; Viruses - 420; Other Eukaryotes - 17362 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G11280.2

Model type
Protein coding
Short Description
S-locus lectin protein kinase family protein
Computational Description
S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61480.1); Has 119975 Blast hits to 118187 proteins in 4400 species: Archae - 104; Bacteria - 13364; Metazoa - 44144; Fungi - 9898; Plants - 34683; Viruses - 420; Other Eukaryotes - 17362 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G11280.3

Model type
Protein coding
Short Description
S-locus lectin protein kinase family protein
Computational Description
S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-domain-1 29 (TAIR:AT1G61380.1); Has 119306 Blast hits to 117553 proteins in 4294 species: Archae - 104; Bacteria - 13114; Metazoa - 43962; Fungi - 9889; Plants - 34469; Viruses - 418; Other Eukaryotes - 17350 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G11280.4

Model type
Protein coding
Short Description
S-locus lectin protein kinase family protein
Computational Description
S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-domain-1 29 (TAIR:AT1G61380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR