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13-2459-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3353876 [Map]; Strand: w
      • AT3G10710.1 - [+] show detail - root hair specific 12
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 13-2459-1 - 3-prime edge 
    TAGGTCACCG AGTGGAGAGA TGTTACAACG GTGAATCGAG ATTCCTGTGT 
    TCATGTTCGG ATCAGTACGT CCTTGAGCCG TGATTGTGTT TTGTTGTCCT 
    TTCATTGGTC GGCGAGGGAG AATCCGGCAG CTTTGGAGAA CTGAAGCTGA 
    GTTACCAAAG ATGAAATCTA CTGTTCCGAT AATGGTGCAT TCACGGTAGA 
    ATTGGCGTTG TGCATGAACG TAAAGCGTGT CTTGGTATGC GTTCATCGTG 
    CAACGGTAAA ATGCTGTGAG ATC

AT3G10710.1

Model type
Protein coding
Short Description
root hair specific 12
Computational Description
root hair specific 12 (RHS12); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: root hair, flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G04960.1); Has 2830 Blast hits to 2766 proteins in 319 species: Archae - 6; Bacteria - 575; Metazoa - 1; Fungi - 191; Plants - 2032; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link
InterPro Scan - TAIR