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13-2806-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 354979 [Map]; Strand: c
      • AT1G02020.1 - [+] show detail - nitroreductase family protein
        Distance: -10; Region: promoter
      • AT1G02020.2 - [+] show detail - nitroreductase family protein
        Distance: -10; Region: promoter
    Flanking Genome Sequence: 13-2806-1 - 5-prime edge
    GGTNANAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTCTTAGAA AACAAAGGTG TAATTGCAGT GGAGTTGTTC
    CCCAAGTCAC AGAGAGAAAT CACAGGCAAT TTTGGTTATC CCTTAACCGG
    TCCATCCATA TCTGAACCGT CCCGGTACAA AGATCCGTTG GTTTCTGGTT
    TTGAGATGTC GAATCCCAGA CAGAGGAAAG GAGAAGCAAT GATGAATCCG
    ACGATTTCGT GGAGGTTCGC GTCTTCGACC TCTCTTCTCT CCATTCCTCG
    AACACCAAAA AGTGCCATTA TCTTCGCCAT GACCTTCTCT TCTTCTTCTT
    CTTCTTCTTC TGTGGAAAAC CCTAACAAGG ACGATTCCTC CTCTTCGCTT
    GAATTGGTCC TCAAGTACCA CAACCAGACG AAGCACTCCT TGAACGGTTA
    CGCGAGAGGT CCTCGTGGTC TCGACTGGGC CAATCAGCCT AATCCCTTCC
    GCCGGTACCT CTCTGCTCCT CTTCTTCCTC TCCAACACCC CAATCACGAC
    ATCGACGACG ACTCCGACTC TCCTCTCTAC TCTACTCTAT TCGACTCGCT
    TCCTCCGCCC AAACCCATCT CTCTTCCTAC AATCTCTCAC CTTTTCTACC
    ATTCTCTCGC TCTCTCCGCC TGGAAGACCA CCGGATC

AT1G02020.1

Model type
Protein coding
Short Description
nitroreductase family protein
Computational Description
nitroreductase family protein; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH, nitrogenous group as acceptor, oxidoreductase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitroreductase-like (InterPro:IPR000415); Has 762 Blast hits to 681 proteins in 314 species: Archae - 126; Bacteria - 594; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G02020.2

Model type
Protein coding
Short Description
nitroreductase family protein
Computational Description
nitroreductase family protein; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH, nitrogenous group as acceptor, oxidoreductase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitroreductase-like (InterPro:IPR000415); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR