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Mutant Lines
13-2808-1

13-2808-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 5487966 [Map]; Strand: c
- AT1G15970.1 - [+] show detail - DNA glycosylase superfamily protein
  Distance: 0; Region: intron1 (CDS)

AAGCTGGTAA GCATCAAACT TTCACCTATC ACACATTGCA TAGTGAGAGA 
GGTTTTGACT TTAGATGCAT TCAAATAAAT GAAATGAGTG AAAATGTGAA 
TGTGAGATTG AGTTTAGCCT GATTGTGTGA GATGATAAAG TTCTTATCTA 
GTTGAATCAA ATGGGACTGA ATTGAGACAA GGAGCTAGTG TTTTTTGTTT 
GATCTAATTA TGTTCTTCTG TATGTGAATA TTAAGTAATT CAATGGCCAA 
CAAAATGTTT CAATTGCTAT GTATTTTATT CAGTGAGCAT TGTGTAGATC 
ATTTGCTATG TTGCATAACT TATGAAGTAG CTTGTCCTGA AGTTCTCTTA 
TAAATATTTT AACTTCTCAG TGTCCATGAA ATTTAGATGA AGGATGTTTT 
GATTAGCTGA TAGATCCACT TCGTTTATGC TTTTAGTGTA AGCCAAACAG 
CGTTTTCTGG ATTCTCTATA CTAATGAGCA TAAATGTTTC CATGCCAAGA 
GGCACTTTCC ATTATTCTTT GTTGTTCTCT CATGCTTCAT ATCTTTCTCT 
GCTGTAAATT GACTAATAAT GTTGCGTTTT TCTACGTTGT AAAGACCCGT 
GCTATGTTGC TTTCCATGAC GAANAATGGG GAGTTNCTGT ACATGACGAC 
AAGTATGTGG CATCCTCAAN TATTTTCCTT CTATCTGAAA TNACTTTGNA 
GTATAAAAGC CNTTACNGCN TNGTTAACTG GGNAN

AT1G15970.1

Model type: Protein coding
Short Description: DNA glycosylase superfamily protein
Computational Description: DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT1G80850.1); Has 3684 Blast hits to 3684 proteins in 1581 species: Archae - 10; Bacteria - 3170; Metazoa - 10; Fungi - 2; Plants - 164; Viruses - 0; Other Eukaryotes - 328 (source: NCBI BLink).
Link: InterPro Scan - TAIR