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Mutant Lines
13-2829-1

13-2829-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 17903629 [Map]; Strand: w
- AT4G38160.3 - [+] show detail - Mitochondrial transcription termination factor family protein
  Distance: 0; Region: intron2 (CDS)
- AT4G38160.2 - [+] show detail - Mitochondrial transcription termination factor family protein
  Distance: 0; Region: intron2 (CDS)
- AT4G38170.1 - [+] show detail - FAR1-related sequence 9
  Distance: -929; Region: promoter

CGGNAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
TCCCATCCTA CTTTCATCCA CTGTGGCCCG ATCAAGNGCA TNTACCTAGA 
GNGGNTCCTG TGCNTNCAGG NATTCAACCT GCAATCAAAA TGGGATGTAT 
ATGTTGTTGG ATAAGTCAGT GTCATTATTG GCTTGTGATT ATTGCAGCAA 
CCGACAAGCA AAAGAAGTGT CTGCTTAGCC TAACTGCAGA ACAGAATATG 
CAGCAATGCA GTCTAGCTGC TTGTCGGAAG TATGGGTGGG TAAAAAGCCC 
CTAGTCATTC CACAAATATG GAGGCCCCTA GTCAAAGGTC ACATTTGATG 
ACAAAGAGAT GGTTGATCGT TCTCTGCCTA TATAGTATGT ACCTGTCATA 
TAAAAATGAG ACCCCCTCTG CTCTCTCTTT TGGATGAGAT CAACCGTATT 
TTAAACCGGC CAAACTTGAA AGTTTTTTTT TGCTTCAAAT GCTCTTTNAA 
GTANAGTCCC TTTTGTTATT CACGTTTTGN AGCTATTCTA TTCTCTCTCC 
TTGGACTGGN GTTTNTGTNC TTCGGGTTTT CCGATCAAAG TTGAATCAAN 
AAGAAGTTCG ATATGNCCGN CTTCNCTGNN TCTTGTGGTT GCTTGNNGGG 
CTTNTGGGCC TTTTTTNANT TTTTCTTTTT GGGCCNTGTG TGCCANGTTT 
TNNNGNNTTN NTGCTTGGNG GGCCTACGAG CCTTTNNAAC CTTGGANNNT 
TTTTTNGTTT AAGNCACTNA ANANTGTGGG NNNCNGNCCA AAAACAAAAT 
AAGNC

3 prime edge [+] show sequence

Chromosome: 4; Position: 17903623 [Map]; Strand: w
- AT4G38160.3 - [+] show detail - Mitochondrial transcription termination factor family protein
  Distance: 0; Region: intron2 (CDS)
- AT4G38160.2 - [+] show detail - Mitochondrial transcription termination factor family protein
  Distance: 0; Region: intron2 (CDS)
- AT4G38170.1 - [+] show detail - FAR1-related sequence 9
  Distance: -935; Region: promoter

ATNAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTG 
GTGGTTCTAT CATAATTAGG TAATTTTCAA AAGGAAGTGT AGAATCCATG 
ATAAACGAAT GCATAGTGAA TAATCGATGA TATCTGGAAG AAAACACTCT 
ATTGATATCA CAATCACTCA AGGTAAAGCT CGTGCTAGAA ATTGGTGCAC 
AAGCNTGAAA ACAGCTTACA GAGAGAGCCT GATGAAGGAA AAAACTAGAG 
AGAGATATAA AAGCTAGGAG CTTGCAGTTA CCTCCGAAAA GCCAAACTTC 
TCATGGAATT TCTTTGTGTT ACAGTCCAGC ATTTCTCTAA GGCTGCAGTC 
AATGTTGTTC TTTTTGACAA GTTTAAACCT CGATTCGACC TTCTTCTTCA 
ATCCATGGTG AAAGAATT

AT4G38160.2

Model type: Protein coding
Short Description: Mitochondrial transcription termination factor family protein
Computational Description: pigment defective 191 (pde191); CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G21710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38160.3

Model type: Protein coding
Short Description: Mitochondrial transcription termination factor family protein
Computational Description: pigment defective 191 (pde191); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G21710.1).
Link: InterPro Scan - TAIR

AT4G38170.1

Model type: Protein coding
Short Description: FAR1-related sequence 9
Computational Description: FAR1-related sequence 9 (FRS9); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PMZ-type (InterPro:IPR006564), MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 5 (TAIR:AT4G38180.1); Has 1073 Blast hits to 1051 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 2; Plants - 1067; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR