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13-2913-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1289710 [Map]; Strand: c
      • AT1G04625.1 - [+] show detail - Polynucleotidyl transferase, ribonuclease H-like superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-2913-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCGA 
    GCTGTCAATT TCTTGCAGCT TGCTGATGAA TCATGAAACT GTTTTTGCCT 
    CATATTACGA TTGAAACACT TAAGAGAAAA CCAATACAAG AAGAATACTG 
    TCTGTTGAAT CATTCTCTTA TTACCCGAAG AAAAAAAGAT ATAACAAGAA 
    CATATCAATC CTCAGCGAAA CATCATTCAT CATCATCATA TGCATTTGAG 
    AGAAACTAGG AAATCACCAC ACATCAGGAC GGAGTTCCCC AGTAGCCGGA 
    GGCATCCAGC GACCAGAATT GTACACATTC TCGCCAACTT TCCATCCCGG 
    AACATCTTTC ATTACATCAG CCTCATATTC CAGATACTTT TTCCACTCAG 
    ACACAAACCT AGAATGCAAA ACGGGGATTG AAACAAGATT GCTATCTGAA 
    GGTTGCTGCA GGCACATTGA CTTAAATTTG AGAATATGGT TTACCTTTCA 
    TCTTCTTCTG CTTGAAGAAT GGGAAGTATT GTTCTACGAG CAGCATATTT 
    CTCTTCCTTC AATGCCCTAA ACATCACATC AATCTTGATA AGAGCATTAA 
    TCTTGATACT TACTGATATC AAACCAGACT TGTTTAGGAC CATTGTAAAT 
    GCATAAGAAG TTAATGATCA AGCCAGATAT AATACTAAAA CAATCTATCT 
    ACATAGAAAC AGTATCCCGA TAACTACTAT CAAAACATGC AACTAGTAAT 
    TGCTTTCATC ATAACAGATT CTCACATCTT TGCAATTGTG GCTTTAAGAG 
    TTTACAA

AT1G04625.1

Model type
Protein coding
Short Description
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Computational Description
Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT2G46460.1); Has 296 Blast hits to 296 proteins in 17 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 291; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR