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13-2957-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7768004 [Map]; Strand: w
      • AT1G22040.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 13-2957-1 - 5-prime edge 
    CGGGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CNNTACATAC CNNNNTCTAN ATNCCNNCNC TCCTCANTTN 
    CTCATCNTTN GCTNGGGCGG NGAGATNTTN ATGTCCCGAT NTCTCTCTGT 
    TACTCTTCAC TCTCTGAACT AATTTCGAAA ACCTCATTTT TTTAAAGTTT 
    TATACGTTTA GGTTTTATCG ATTCTGGAAT TGGACTTAGC TCTTGAGGTT 
    TATGTTTTGA TCTATGTCGG ATTCATAGAA AAATAAAATT AGGGTTTACT 
    TGTATCGGAT TAGTGTTGCA AGCCCATTTA TTGATCATGT GTGTTTTTAT 
    TGCAAAGTTT GGTTTTTTAT TCCTAATTAC GCCTAATTGT TGGGAAATTT 
    ATGATTTGTT GCAGTGACTC TTCTTGATTT CATCAATAAT GGGTTCTGTT 
    ATGAGTTTGA GCTGTTCCAA GAGGAAAGCA ACGAGTCAGG ACGTTGAGTG 
    TTCAAGCGAA TCTCGTAAAA GACGAAAGAT ATCTTCAGAG AACGATGAAG 
    AANAGTGTTG TAGATTGATT CCAAGTCTTC CTGATGAGTT ATCTATACAG 
    ATTCTTGCTA GGCTTCCTAG AATTTGNTAC TCNAGTGTTC GGNTGGTTTC 
    TNGGAGGTGG AGATCGGCTG TTTCGACTTC TGAGGTGTNT AGNTTGGAGG 
    AAAGAACTTG GGAGGACTGA GGAGTGGGTC TNTNTGTTGA CTAANGGGCN 
    TGAGGATAAN CTACCANCCC GGGCCGNNNA CCACCCNGCC CCCAANNNNN 
    NNCNNNG

AT1G22040.1

Model type
Protein coding
Short Description
Galactose oxidase/kelch repeat superfamily protein
Computational Description
Galactose oxidase/kelch repeat superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G55270.1); Has 10813 Blast hits to 5578 proteins in 328 species: Archae - 18; Bacteria - 659; Metazoa - 8206; Fungi - 35; Plants - 1449; Viruses - 72; Other Eukaryotes - 374 (source: NCBI BLink).
Link
InterPro Scan - TAIR