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13-2979-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 18608046 [Map]; Strand: c
      • AT3G50180.1 - [+] show detail - Plant protein of unknown function (DUF247)
        Distance: -884; Region: promoter
    Flanking Genome Sequence: 13-2979-1 - 5-prime edge 
    CTGAGAAATC ATATATAAAA CTCACATCTA TNATTTATAA AATAAAATTG 
    TTATACAATA ACCTTTTAAA AAAAAGATTT GCATTTAATA TTCTGGATGT 
    ACAGTTTGTT TTGTTTTGTT TCGTCTCCTA ATAATTGTTA GTCTTACATG 
    AAAAATGAAA TCAGTTAATA GTTGAACTTT GGTAACATTT TTTTTCTCAT 
    GACTTTGTTT TATTTTATGT AGTTATTGAA TATATATATA TATACTACAA 
    GCTATATATG AGAGTCGACA AATTTATTAA GAGTACATAG TTTTNCCTTT 
    TTTAATGANA GTTTNGGAGT TGAAATGCAG AAAAAGAATA AATTAATTAA 
    TCAAATTCAA ATCTCACACG NNGGATATAG TATAAACTAN AAGCNTTTAT 
    TAGAGTNTTT TTATAANAGT TNTGTAGATT TCAAAATAAG CAAACACANG 
    GCCNGTTCAC AGCTTTAAAA TTATTTACAG NGNGGCTTTG ACATTTNCCA 
    AANNANGNCN CGCTCTCCNC TCTCTGGAAA AAGANANNAN CCCGGGCCGN 
    NGACCCGNGG GNCCCTANAN NGNGNNAAAA AAAAANNAA

AT3G50180.1

Model type
Protein coding
Short Description
Plant protein of unknown function (DUF247)
Computational Description
Plant protein of unknown function (DUF247); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: petiole, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT3G50120.1); Has 18820 Blast hits to 10177 proteins in 649 species: Archae - 36; Bacteria - 1683; Metazoa - 7662; Fungi - 1574; Plants - 4386; Viruses - 842; Other Eukaryotes - 2637 (source: NCBI BLink).
Link
InterPro Scan - TAIR