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13-2993-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30130066 [Map]; Strand: w
      • AT1G80080.1 - [+] show detail - Leucine-rich repeat (LRR) family protein
        Distance: -475; Region: promoter
      • AT1G80090.1 - [+] show detail - Cystathionine beta-synthase (CBS) family protein
        Distance: -38; Region: promoter
    Flanking Genome Sequence: 13-2993-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TCCATGGGCA TGTGCTTTTC GTATGCACAG ACCACGCGTC CGTTTATTCA 
    GATTCTCGTG TTACAACAAA ATAATGATTT TAAGGTTCAG AATCAAACAT 
    ATGAAACTTT TTATCAATTG CTATCTACGG TTTGTTACAA AAACAAATAC 
    AGTGCCCAGT TCAAAATACA AATTGAATAA TAGCCCAACA TATCGTAAAT 
    GGGAAAATGG GCTCAGCCCA AATAAAAAAA AAGTAAACGA TAAGGAGACG 
    TCGGGTCCCG TTCACNAAGC GGTCGGATCT AGGGCCCAAC ACAAGACGAA 
    TGAAGGGAAT ATCTCGTGAA AGCAATAAAT GCAGAAATCG AGAATCATGA 
    ATTTTATTTA TTTCGCTCCT CGAGTTATCC CGTGAAAGTC ATAAAGACAT 
    TGCGAACGTT TTTATGGACC CACCAATTGT TTCTTCAGAA TTATACATAT 
    ACACACTGAC AATTTCGAAC CTAAACCGCA TTCACACAAC AACAACAACT 
    AANAAATGGC ACGATATGAA TT

AT1G80080.1

Model type
Protein coding
Short Description
Leucine-rich repeat (LRR) family protein
Curator Summary
Encodes a transmembrane leucine-repeat containing receptor-like protein that is expressed in proliferative postprotodermal cells. Recessive mutation leads to disruption of asymmetric cell division during stomata development.
Computational Description
TOO MANY MOUTHS (TMM); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 29 (TAIR:AT2G42800.1); Has 88991 Blast hits to 28047 proteins in 1079 species: Archae - 16; Bacteria - 3330; Metazoa - 23111; Fungi - 805; Plants - 56845; Viruses - 0; Other Eukaryotes - 4884 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G80090.1

Model type
Protein coding
Short Description
Cystathionine beta-synthase (CBS) family protein
Computational Description
Cystathionine beta-synthase (CBS) family protein; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) protein (TAIR:AT1G15330.1); Has 517 Blast hits to 517 proteins in 144 species: Archae - 0; Bacteria - 47; Metazoa - 83; Fungi - 146; Plants - 195; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).
Link
InterPro Scan - TAIR