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13-2998-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8549790 [Map]; Strand: c
      • AT1G24150.1 - [+] show detail - formin homologue 4
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-2998-1 - 3-prime edge 
    GAAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTT 
    GTAGCAGCCG TGTTCTTCTT CCTCGTCCAT AAATGTAGGC GGAGGAGAAA 
    CAGAGTCGGT GGCGTTGACA ACACCCTTCA ACCACCGGTT CCTCCGTTGG 
    CGGAAGCGGC TTTAGCTCGT GAAGGGTTTA CTCGATTCGG CGGAAACGTA 
    AAGGGTTTGA TTCTAGATGA GAATGGTCTC GATGTGTTGT ATTGGAGAAA 
    GTTACAACAG AGTCAAAGAG ATAATAAAGG TGGAAGCT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8549720 [Map]; Strand: c
      • AT1G24150.1 - [+] show detail - formin homologue 4
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-2998-1 - 5-prime edge 
    GGTNAAGCGG ANCGCNCAAN GGANAGACNC AGGNGAANAA AGNNGACAAC 
    CAGGTNCAGG GAGTCAGANN AAGCCGTGAG NGANAGGGGG NNNAAAGAGA 
    NCCGANCATG CGGNGAGANA GGGNGATTGT ATNNTTNGGG AAACATGCNT 
    NAANGNTAGG AGGAGAATAG GATGGAGAAA AGGATTGANN AGGGAAAAAG 
    AGGATTAGGG TTAAGAAAAC TAGGGNTAGA TGAGGAAGAA ACGGTGGCCA 
    TGGATGAATN NACATGGCAG NNATGGAAGA TTAACTCATN NGGTTAGANA 
    ATTNAGGAAT CAATGGAAAA AAGGNAACGA NNNNANGGNN GAGGANGAAG 
    ANANGAAGGT NNNNGAGNGN ANGNNNGNAA ACGANGCNNC CNGNNGANGA 
    NTGGAANNGC CGGGNACCAN CNANGAAAGG GGGCGGAGNA NAAGCGNNGA 
    CANAATAGGC GNGAGAANNG NCNNGGTAGG NACNGAGNTN GGTNGGANAG 
    GGTGTNNGAN TTGGACNGAG AAANANNGNG GGANGTGGCG GNGAGNGNAN 
    GANGGNNNNG ATAGGGCGAA CCTGNAACNG GGGATGANCC NTNGNGGNGN 
    GGGAANGGGC GNGAGGATGG AGNTNGACAN AAANGGGNNG GGANAANTCN 
    GCACANGGTG AACNNNTTCN ATTGANCGNA NTTNNCGGAA CCATNNTANN 
    GNNNNGNGAG NAANAAANAG TNGNTACATN CGCGAGGGGG NCAGNTNGAC 
    NAGAGANAAG

AT1G24150.1

Model type
Protein coding
Short Description
formin homologue 4
Curator Summary
Encodes a group I formin. Localized to cell junctions. Polymerizes actin. Binds profilin.
Computational Description
formin homologue 4 (FH4); FUNCTIONS IN: actin binding, protein binding; INVOLVED IN: actin filament polymerization; LOCATED IN: cell-cell junction, plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: formin 8 (TAIR:AT1G70140.1); Has 28239 Blast hits to 15205 proteins in 945 species: Archae - 44; Bacteria - 3418; Metazoa - 10057; Fungi - 3019; Plants - 7022; Viruses - 1317; Other Eukaryotes - 3362 (source: NCBI BLink).
Link
InterPro Scan - TAIR