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13-3150-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 303970 [Map]; Strand: w
      • AT5G01780.1 - [+] show detail - 2-oxoglutarate-dependent dioxygenase family protein
        Distance: 0; Region: intron1 (CDS)
      • AT5G01780.2 - [+] show detail - 2-oxoglutarate-dependent dioxygenase family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 13-3150-1 - 3-prime edge 
    CTCTCCGATC CCAAAGACGC ATGTGAGTGA TCGTTTTCGC ATTCTCTAGA 
    CTATTATCTT TCAACCTAGT TTCGCTGATT TTGAACCATT TTTACTATGC 
    CGCTGATCGC ATGAATTTGA TTGGAAAAAA ATGCTCTCAT GCTTTCATAG 
    TTTATATTCA ATTTCCAGTG GCATACCATA TCAAGTACTG TTGTTTAGAG 
    ATTATGAACT CTCCATTGGC TCCCAGTGAT TTTCCTATGA TCAAAGCATA 
    ATCGTGGCGG TATCTAAAGG ACACGTTATG TTAATTCTGT TAAGCAGACT 
    GCATCGCTTG ACTCACTTAA TGATTATGAA GAGCAATTTC CACCACTTAC 
    TGGTGGCTCT AAGACGAAGA AGTTTTATCT TGGTTCTACC AATCCTTCTA 
    CTCCATGTCA AAGTTCACAG CTTCAAAACT GGACAAGCGG TAAGGATGCT 
    TTGTCTTTGC AGAGGAATTT GGGATGTAAG AATAGGAGGA GGAGACGGGC 
    TTCACGGTTT TTACATGAAG AATCCAATGG GACAACTTTT GAGGTTGGCG 
    CTGGTATTGG CTCTCCAACA AGTATGGTTC ATTTTGATTC TACCAACCTT 
    TCTTCTTCTA GTAAAAGTTC ACAATCTCAA AATTTGAAAA TCCNCAAGGT 
    TAGGAATCAC AGGAATTACC ANCCCGGGCC GCGACCACCN GNNCCCNNNA

AT5G01780.1

Model type
Protein coding
Short Description
2-oxoglutarate-dependent dioxygenase family protein
Computational Description
2-oxoglutarate-dependent dioxygenase family protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate-dependent dioxygenase family protein (TAIR:AT3G14160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G01780.2

Model type
Protein coding
Short Description
2-oxoglutarate-dependent dioxygenase family protein
Computational Description
2-oxoglutarate-dependent dioxygenase family protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: 2-oxoglutarate-dependent dioxygenase family protein (TAIR:AT3G14160.1).
Link
InterPro Scan - TAIR