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13-3173-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1170831 [Map]; Strand: c
      • AT1G04360.1 - [+] show detail - RING/U-box superfamily protein
        Distance: -1953; Region: intergenic
      • AT1G04370.1 - [+] show detail - Ethylene-responsive element binding factor 14
        Distance: -4346; Region: intergenic
    Flanking Genome Sequence: 13-3173-1 - 3-prime edge 
    GATGGATCAG CATTCAGCAG CACGTGATGC TTGGTCGGTC ACGTGTGTGC 
    GTCAGACCAT CATCGATACA CGTCGCTCCG AGATATGAAC TCGATCTCTA 
    TAATTTTCTT TGTTTTGTTT TGATGTTCGA GATTCTATTA GTTGCATTGA 
    TCAGAATCGT CTTCTAGCCC TACGCTACAC TATAAAAACA TTCTTAACTG 
    GAAATAAATT ACTAGAAATT CCAAAACTTA TGCATTGATC CGATGGTTTT 
    TGGTTTGGCT AAATACAAGA GATTAATATC TAACTGAGTG TTACTGTATA 
    TAATAACGTT AATGTAGATC

AT1G04360.1

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Computational Description
RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G43420.1); Has 9268 Blast hits to 9239 proteins in 300 species: Archae - 0; Bacteria - 0; Metazoa - 2276; Fungi - 656; Plants - 4907; Viruses - 85; Other Eukaryotes - 1344 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G04370.1

Model type
Protein coding
Short Description
Ethylene-responsive element binding factor 14
Curator Summary
encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.
Computational Description
Ethylene-responsive element binding factor 14 (ERF14); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G43410.1); Has 6105 Blast hits to 5744 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6091; Viruses - 2; Other Eukaryotes - 12 (source: NCBI BLink).
Link
InterPro Scan - TAIR