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13-3235-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 21233769 [Map]; Strand: w
      • AT1G56650.1 - [+] show detail - production of anthocyanin pigment 1
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 13-3235-1 - 3-prime edge 
    GCTATTANGG TTCCTGAGGC GACNACAACN GANTNGGGGG ACACCNNGGC 
    TNNNGACNTT GATCAACTCT GGAGTCTTTT CGATGGAGAG ACTGTGAAAT 
    TTGATTACGT GTTNCNGAAC ATTTGTTTGC AGTTTGTGTA TAGGTTTGCN 
    TTTCACCTTT TAATTTGTGT GTTTTGATAA ATAAGCTAAT AGTNNTTAGC 
    ATTTTAATGA AATATTTCAA GTTTCCGTGT TTACATTTTG AAGAAAATAA 
    AATATTAATA TATTCTGAAG ATTTTTGTTT TTTTTNGGTT ATCTACATGA 
    CANCANTNAA AATNGAAAAA AAATCTTATT TTTTGAAAAA GGTATGTATC 
    CGGNGTTTAA AATACTTTCC GAAATCAAAC CGCCTATATT TCTAATCACC 
    TNTGTAAAAT TGTAAACCAA TNGGGTTAAA ACTCAACTAA CAAACTTTTT 
    TAAATAAANG TNATTTNTGT NTTTCAGATA TGATTGANCN CGNATTAAGN 
    AGNTTTACCC TTCANTACCA AACCTTCTNT ACCNACCNTG TNTGGTTTGG 
    GCAANTGTCA TGTCNNACNA TTGTTCNAAA TTNACTANCA CCCCTTTGTT 
    GGAAAAGGCA NNGCTTTNTT TATNATATTT CTNAAGNNAT GNTTNAAGGT 
    AATNTTNATT TNTTNTTAAA NGCANCACNG TNTGTTACCG GGCNNATTCT 
    NNTNTTGGGC TTTNTTTTNN GGANAATNGA TTNNCN

AT1G56650.1

Model type
Protein coding
Short Description
production of anthocyanin pigment 1
Curator Summary
Encodes a putative MYB domain containing transcription factor involved in anthocyanin metabolism and radical scavenging. Essential for the sucrose-mediated expression of the dihydroflavonol reductase gene.
Computational Description
production of anthocyanin pigment 1 (PAP1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 90 (TAIR:AT1G66390.1); Has 8761 Blast hits to 8206 proteins in 539 species: Archae - 0; Bacteria - 0; Metazoa - 765; Fungi - 472; Plants - 5883; Viruses - 3; Other Eukaryotes - 1638 (source: NCBI BLink).
Link
InterPro Scan - TAIR