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13-3273-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 13951607 [Map]; Strand: w
      • AT5G35777.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 13-3273-1 - 3-prime edge 
    AACATCACCA GCTGCATATG GAAAAACATC TTCCCGGAAA ATAACAACAC 
    GAGATATGAA AAATTCATTT TTCTCCAAAT CATAAACCTT CCATCCCTTC 
    TTTCCATAAG CATAACCAAC AAAAATGCAA AGTCTACTTC TTTCTCCAAA 
    TTTATCTTTG TCTCGAGCCA TACGATGAAC ATAACAAGCT GAACCAAACA 
    CTCGGAGTTG ATCGTAGGGA GGCTTGCTGT TGTGTAGAAT TTCATATGGG 
    GAACGACCAT TGTTAACTGA AAAGGGTGTG CAATTGATGA GATATGCTGC 
    AGTAAGAATT GCTTCTCCCC AAAACTTGAT AGGTAAGCTA GCTTGGAACA 
    ACAATGCCCT AGCAACATTA AGAATGTGGC GATGTTTTCT CTCAACTCTA 
    CCATTCTGCT GTGGCGTCGC AACACAAGAT GTTTGATGTA TGATACCCTG 
    CTGCTTAAAG TGAGAAGAGA GGCACATAAA TTCAGTCCCG TTGTCACTCC 
    TAACGATTTT TATTGTTTTT CCAAATTGTT TCTCTGCATA TGCAATGAAG 
    TTTGTCAACA CATTTCGTAC CTCTGACTTT TGAAGAAGCA GATATGTCCA 
    CATCGCTCTT GAATAATCGT CAACAATAGT CAAAGAAGTA AACTGCTCCA 
    CATGAAGATG GAACCCGATA AGGCCCCCAA ACATCGCAAT GTATTAAAGA 
    AAAACAATCG TTTGCTTTAT T

AT5G35777.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 2.0e-67 P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea)
Link
InterPro Scan - TAIR