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13-3324-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17904436 [Map]; Strand: w
      • AT4G38170.1 - [+] show detail - FAR1-related sequence 9
        Distance: -122; Region: promoter
    Flanking Genome Sequence: 13-3324-1 - 3-prime edge 
    TATCTAAGCC TACACTCTCC TGCCGTTTTT ATAACATAAA ACGGCAAGCT 
    GTTAGTTTAC CATAACCAAT GTTGCGAGTT GGGACTGGTA GGCAGGCCTA 
    GTCCTTAATT TTGGGCCCTT AAAATAATAA ATTAAGTCGG GCCTATTTGA 
    GTTTTTTGGT CCGTCAACAA ACAATTATTG AGTGCTTTAA ACAAAGAAAA 
    CTACAAGGCT CGAAAAGGCA CGTAGGCCCA ACAAAGCAGA AATGCCGAAA 
    ACATGGCACA CAGGCCCAAA ATAGAAAAAA TCAAAAAGGC ACAGAAGCCC 
    AACAAGCAAC CACAAGAAAC AGCGAAGACG GACATATCGA ACTTCTTCTT 
    GATTCAACTT TGATCGGAAA AACCGAAGAA CAAAAACACC AGTCCAAGGA 
    GAGAGAATAG AATAGCTACA AAACGTGAAT AACAAAAGGG ACTCTACTTG 
    AAAGAGCATT TGAAGCAAAA AAAAACTTTC AAGTTTGGCC GGTTTAAAAT 
    ACGGTTGATC TCATCCAAAA NAGAGAGCAG AGGGGGTCTC ATTTTTATAT 
    GACAGGTACA TACTATATAG GCAGAGAACG ATCAACCATC TCTTTGTCAT 
    CAAATGTGAC CTTTGACTAG GGGCCTCCAT ATTTGTGGAA TGACTAGGGG 
    CTTTTTACCC ACCCATACTT NCGACAAGCA GCTAGACTGC ATTGCTGCAT 
    ATTCTGTTCT GCAGTTAGGC TAAGCANACA C

AT4G38170.1

Model type
Protein coding
Short Description
FAR1-related sequence 9
Computational Description
FAR1-related sequence 9 (FRS9); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PMZ-type (InterPro:IPR006564), MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 5 (TAIR:AT4G38180.1); Has 1073 Blast hits to 1051 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 2; Plants - 1067; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR