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13-3333-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3162624 [Map]; Strand: w
      • AT5G10100.2 - [+] show detail - Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
        Distance: 916; Region: intergenic
      • AT5G10110.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 3815; Region: intergenic
    Flanking Genome Sequence: 13-3333-1 - 3-prime edge 
    ATGATATTTA TCAGATAATA TTATATCAAC TCACATTTTG AAAGCACTAC 
    GGTTAAATAA CATAAGTGAT GGATACATGA TAACAAATCT TCTTTGGAAG 
    GTCTACATTA TAACCAATTT CAATATATAT ATAGTGTTGT TGAAAACGAG 
    TATCGGCAAT TTCATGTACT TAAAAGTTAG AAAAATGGTT GTGCATAGTG 
    GGGGTGAACA ATCCTAGTTA TTGTATTTTT TTGGTTGGCA ACGTGACTAA 
    GGGTCTGACT GGTTTAAACG CAGCGGGTGC GGTTGCGGTT GCGAGAGTTT 
    GCGGAAACGG GCGGTTGCGG TTTCAAGCGT TATCAAGCGT TTTGAACGAC 
    TGGTTGAGCG TTTGATAATG AGTGCGTTTG CGAGAGTTTT ATGACTGGTA 
    AACCAGCGGG TGCGATATTA ATTAAATAAA AAATAATCAA AATAAATATA 
    ATATATTACT ATTAAAATGA ATAAAAATAC AATATATTAT GATAAATTGA 
    TAATATTAGA AAACTTGATT TTCTGACCAA ATAAAAATAC AATATATCAT 
    CTCGTCCGAC CAAATGAATT

AT5G10100.2

Model type
Protein coding
Short Description
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Computational Description
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: catalytic activity, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: embryo, root; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G65140.1).
Link
InterPro Scan - TAIR

AT5G10110.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR