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Mutant Lines
13-3344-1

13-3344-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 4159897 [Map]; Strand: w
  - AT1G12250.1 - [+] show detail - Pentapeptide repeat-containing protein
    Distance: 0; Region: intron3 (CDS)
  - AT1G12250.2 - [+] show detail - Pentapeptide repeat-containing protein
    Distance: 0; Region: intron3 (CDS)
Flanking Genome Sequence: 13-3344-1 - 5-prime edge
```
GTTGAGATGA ACTCTGTTTC TTTTGCAGCA AAACAGTTCA CTCCAATGAA 
AATTTCAGGT AAAAATTTGA CTGTAGTTTG TCATGATAGA GTTTAAAGCT
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 4159781 [Map]; Strand: w
- AT1G12250.1 - [+] show detail - Pentapeptide repeat-containing protein
  Distance: 0; Region: intron2 (CDS)
- AT1G12250.2 - [+] show detail - Pentapeptide repeat-containing protein
  Distance: 0; Region: intron2 (CDS)

ATCTCAACGA ACTATCAGTC TATCACCATC AAAAACAAAT GAAATTCTTT 
AAAGAACTTT AAGACAAGAA CTCTAAATGA TACCTGAGAT CAGCAGAACC 
GTACTGAGCA GCCGAGCCAA TCCCAAACTC GCCACGTGTA TCGGCCTCGA 
ACCTGTTAAG CTCTGCCATG GCCGGAACGC CGGAGCTCGA GGCTATAACA 
GCCGCCGCCA TTGCTGCAGA CAAAATCCTC TTCCATGTAT TTGACTCAGC 
GCTGGAACAA CAATCTTCCC TTTTCGAAAA ACAATTCAAT CCCCTAAGTT 
TCTAAGACAC TAAGATTTGC AAATAACAAG AAAAACATTG AGATTCTATG 
TTTTGCTAGT GAAAGTATTC GAGTCTCACT CACCTAGTGT TTGATGAATC 
TTTGATTTCT AAGTTTGAAC GGGAACTTAG CTGTAGACGT CTCAATGGGT 
ATCTCTGAAA ATGGTAAGGA GATCTTGAGA CAGAAGATGA GGATCTCGAA 
ATGTCAAGTG ACTTCATAGG TAGAGGAGAT AGAGAAGAGA AAGCCATTGT 
TAAAAGTCTA AAACTTTTGC AGGGGGAGAA ATGATACATT TCAACTTTGT 
AGAANAAGAG ATGAATTTTG CACGTGTGAA GGATTTTCNA ACTTTATCCA 
CTTTGCTTGG GGCAAAGGTG TGCCACACGT ATGTCNCNTA TGTTNCACCC 
GTTTTNGTTC CTTGGGC

AT1G12250.1

Model type: Protein coding
Short Description: Pentapeptide repeat-containing protein
Computational Description: Pentapeptide repeat-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentapeptide repeat (InterPro:IPR001646); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G44920.2); Has 7687 Blast hits to 4280 proteins in 513 species: Archae - 134; Bacteria - 5724; Metazoa - 1; Fungi - 0; Plants - 235; Viruses - 4; Other Eukaryotes - 1589 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G12250.2

Model type: Protein coding
Short Description: Pentapeptide repeat-containing protein
Computational Description: Pentapeptide repeat-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentapeptide repeat (InterPro:IPR001646); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G44920.2); Has 7775 Blast hits to 4220 proteins in 505 species: Archae - 143; Bacteria - 5794; Metazoa - 1; Fungi - 0; Plants - 235; Viruses - 4; Other Eukaryotes - 1598 (source: NCBI BLink).
Link: InterPro Scan - TAIR