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13-3357-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 22594403 [Map]; Strand: c
      • AT5G55830.1 - [+] show detail - Concanavalin A-like lectin protein kinase family protein
        Distance: -252; Region: promoter
    Flanking Genome Sequence: 13-3357-1 - 5-prime edge
    GGTCTGGTAC ATGGGACGCA AAAATCAAAA CTGACCGTTT TAATGGAATC 
    TATATAGCGC CACCACGTGA ATAGAAATAT TATTGATCTT TTACTTCATT
    TAAGTTTCTG TCTATTTTAT CATATAACTC AATTTGACTC ACCCACTATG
    GTTGACTGTT TACTGTTAAC TGTTTTGTAG ACTAGAAAAA GCATTCACTA
    CTTTTGAAAC AGATACTGAA ATTGATACTA GTGAATTTCT GTGATTATAC
    CATCTCAGTA AACATATTTA ACAAGTTCAA CAGCATTTTT CAATCCGTTG
    TGCAAAAGTG AGCGAGTGCT AAATAATAAA TCCCACAATT GTGATTTGTG
    ACTACTTTAT TTAAGTTCTG AATT
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 22594519 [Map]; Strand: c
      • AT5G55830.1 - [+] show detail - Concanavalin A-like lectin protein kinase family protein
        Distance: -136; Region: promoter
    Flanking Genome Sequence: 13-3357-1 - 3-prime edge
    ACCAGACCCC ACCCGACCCG CTCCACCACT TTTGTTCCCA CCCTTAAAAA 
    CGACAGCGTT TCACACCAAC CTTAATAACC GTTGCCACAG TAAAAATACT
    ATAATACCCT CACCTTCTTC ATAATCATCA ATTCGAATCC ATTTTCCCAC
    CACAGTAATA CCGAAACTTT CTCTTCTCTC TCTCTCTAAT GTCTCTATCA
    AGAAAGCT

AT5G55830.1

Model type
Protein coding
Short Description
Concanavalin A-like lectin protein kinase family protein
Computational Description
Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT3G53380.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR