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13-3369-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 6677155 [Map]; Strand: w
      • AT1G19310.1 - [+] show detail - RING/U-box superfamily protein
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: 13-3369-1 - 5-prime edge 
    ANANANGGGG NGGNGNAACT GNTNAGAANA NCTGAGTGNA AATGAAGNNN 
    NATNGGNCNG GNNANAANNC NNNGTCTTGA GGANANANAN NATTGATANN 
    NATTGCCAGC ANGGGNGCNT CAGANAAGCA GANGAGNACA GAGAGCATCA 
    NCTAGCCCTN GGCTTGCNTG AGAATANCGT GACAGATATN AGCTAATCAN 
    TTAATGGATC ATACAAATTT AATAATATAC ATTAAAAAAT CCAAAAAAAA 
    ANGAGANAAG TATTTNAAAN AATNAAAACG GAATNTTAAA CCTTTANATC 
    ACN

AT1G19310.1

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Computational Description
RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G23780.1); Has 4673 Blast hits to 4665 proteins in 300 species: Archae - 0; Bacteria - 6; Metazoa - 2731; Fungi - 589; Plants - 822; Viruses - 25; Other Eukaryotes - 500 (source: NCBI BLink).
Link
InterPro Scan - TAIR