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13-3392-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 12129661 [Map]; Strand: c
      • AT1G33440.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 13-3392-1 - 5-prime edge 
    TAACTAAGTA ACTTGTGATT AAAACGGGAT ACTTAAAGTA TATTTAGACA 
    AAAGTTCAAA ACTTTAACAG AAAGTTGTAA TTAAAGTGAG TTATGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 12129776 [Map]; Strand: c
      • AT1G33440.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 13-3392-1 - 3-prime edge 
    CTTAGTTAGA GATGAAAAGT GATGTAGAAT ATTCAAGAGC ATCTAAAATA 
    GAAATGAGAA AGGAGAAAAG AGAGCTAGGG AGGTAGAGGA ACATACAGAG 
    ATTTCGATGA CGCCGAAAAC GAGCATGGTA CGAAAGCT

AT1G33440.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G59740.1); Has 6684 Blast hits to 6582 proteins in 1312 species: Archae - 0; Bacteria - 3263; Metazoa - 486; Fungi - 360; Plants - 2166; Viruses - 0; Other Eukaryotes - 409 (source: NCBI BLink).
Link
InterPro Scan - TAIR