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13-3440-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 170974 [Map]; Strand: w
      • AT4G00380.1 - [+] show detail - XH/XS domain-containing protein
        Distance: 0; Region: exon7 (3UTR)
    Flanking Genome Sequence: 13-3440-1 - 5-prime edge 
    CCTAAAATGA TGATCAAACA AGTTTGTGTT AAGATTATTT TGGCATGTAA 
    CATAGTCAAT AATCTTTTTA TTAAGGTTTC TTCTTGGCTT ATTTTGGACG 
    AGTTAGGCAG TATCTTAATA GTAGTAACAA AGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 170858 [Map]; Strand: w
      • AT4G00380.1 - [+] show detail - XH/XS domain-containing protein
        Distance: 0; Region: exon7 (3UTR)
    Flanking Genome Sequence: 13-3440-1 - 3-prime edge 
    ATTTTAGGTG GCTTTTAACA AGAACTTAAA ACAAAAAGCA TAAACCAAGA 
    TAACAATAAT TACAGATTCG AATT

AT4G00380.1

Model type
Protein coding
Short Description
XH/XS domain-containing protein
Computational Description
XH/XS domain-containing protein; CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380), Domain of unknown function XH (InterPro:IPR005379), Domain of unknown function, putative Zinc finger, XS/XH (InterPro:IPR005381); BEST Arabidopsis thaliana protein match is: XH/XS domain-containing protein (TAIR:AT1G15910.1); Has 52398 Blast hits to 32322 proteins in 2074 species: Archae - 615; Bacteria - 6626; Metazoa - 25839; Fungi - 3724; Plants - 1961; Viruses - 202; Other Eukaryotes - 13431 (source: NCBI BLink).
Link
InterPro Scan - TAIR