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13-3477-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3563043 [Map]; Strand: c
      • AT1G10720.1 - [+] show detail - BSD domain-containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-3477-1 - 5-prime edge
    CCGGTGACAA ACGAACGGCG TTTCTCGAGA AATCGTGTCT TTCCGTTGAG 
    GCTTTCGGGG TTTTCTCGTC GTTGTTGTTG TCTTCGTCGT CGTCGGCGGC
    GTCATCGTCT CCGATTCCAT CGTATAAGCT
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3563159 [Map]; Strand: c
      • AT1G10720.1 - [+] show detail - BSD domain-containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-3477-1 - 3-prime edge
    GTCACCGGAA GAGGAGGCTC AAGCGCGTGG GGTTAAAGAT GATTTGACGG 
    AACTTGGTCA TACCCTCACG CGTCAATTTC GTGGTGTGGC TAACTTTCTC
    GCTCCGTTAC CTGATGGATC TTCTTCTTCT TCCTCCGATC TATCGAACCA
    TCCCAGGTTT AACCAATCTC GGTCTTCAGA TCCTGGATTG AATCAATCGC
    GTTCTTCAGA TCGGGACGAA TCGTGTGTTG GAAGTGATAC GCCGGAGACT
    GGAATTAGGT TTAGGAGCTG GGATTTAGAA GAAAAATTGG CAGAAGGCAA
    TGATCCGGAG GATGAGGAAG AAGAAGAAGA GGAAACAGAT GAAGAAGAAG
    AAGAAGAAGA AGAGATCGCT GCGGTTGCTC TTACAGACGA AGTGCTAGCA
    TTTGCGAGGA ACATAGCAAT GCATCCAGAA ACTTGGTTGG ATTTTCCTCT
    TGATCCTGAC GAAGATCTTG ATGGTAACGT ATACATTGAG TCAAGTCTTT
    CGCTATTAGT CTTCATTGAT TTGACTTATA GGCATATCAA AAGTTTGATT
    ATTTCAACTT TTATCTAATG TAGATTTGGA AATGAGTGAT GCTCAAAGAG
    GTCATGCTTT AGCTATTGAG CGTCTTGCTC CGAGGTTAGC TGCATTGAGA
    ATAGAGCTTT GNCCATGTCA TATGAGTGTT GGNTACTTCT GGAAAGTCTA
    TTTTGTTCTT CTTCTTTCAA GN

AT1G10720.1

Model type
Protein coding
Short Description
BSD domain-containing protein
Computational Description
BSD domain-containing protein; CONTAINS InterPro DOMAIN/s: BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain-containing protein (TAIR:AT3G49800.1); Has 1569 Blast hits to 1461 proteins in 180 species: Archae - 0; Bacteria - 14; Metazoa - 740; Fungi - 179; Plants - 264; Viruses - 21; Other Eukaryotes - 351 (source: NCBI BLink).
Link
InterPro Scan - TAIR