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13-3483-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30081884 [Map]; Strand: c
      • AT1G79970.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -194; Region: promoter
      • AT1G79970.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -194; Region: promoter
    Flanking Genome Sequence: 13-3483-1 - 5-prime edge 
    TGTCTCCCAT TATCACTTAT CAAGTCTTTT CATTTTCATT TTTTTTCTTA 
    AAAAAAGAGA ACAATATTTG TNGACTACAG AAAAAAAAAC AACAAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30081962 [Map]; Strand: c
      • AT1G79970.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -116; Region: promoter
      • AT1G79970.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -116; Region: promoter
    Flanking Genome Sequence: 13-3483-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTCCACGAT 
    CACTCGTAGG CGTTGCTTCC GGTTTTTATT TCTAACATTT TTCTACTCTC 
    TTTTTTTTTT TTTTTNNNNN TNANNNAAAA AAANTTNNNT TTTNNAAAAN 
    NAAAAANNNN NGGGGGGGGA AANAAANNAN NNTTNGGNCC NNTTNNNTTT 
    TTNNNNCCNA AAAAAAAAAN AAAAAAAAAA ANNNAANNNC CCCCCCCCCC 
    CCCNAANTTN NNGGGNAAAA AAAAAANCCC CCCCCNAAAA AAAAANGGGN 
    AACCCCCNAA ANNGGNNNTT NGNNTTTNCC CNNCTNGNAA AAANNNCCCC 
    CCNNTTTGGG GGGNNTNCCN TTTTTTGGNA AAAAAAAAAA NCCCCCCCGG 
    GGGGNAAANT NGNTTTTAAN CCCAAACCCC CNAANNTTTT TTTTTTTTTT 
    TTTNTTNTTN TTTTTNNCCC CCCCCCCCNN TTTNNNNAAA NTTTTTTTTT 
    TNNANCCCCC CNTTTNGNNN NNNAAAATTT NNTTTTTTTT TTTTTTTNAA 
    AAAAANNNNT NAAAAAAAAA AAACNNNAAN GGGGTTTTGG GGGGGGGNCN 
    NNAAACNNGG NNNNNNNANN AAAAACCNGN CNNAAAAAAA NCCCCCCNNA 
    AAATNNNNNN GGGGGGCGNA ANCCCCNGNN NNNNT

AT1G79970.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT2G25690.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G79970.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT2G25690.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR