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13-3586-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 9522654 [Map]; Strand: w
      • AT4G16920.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 13-3586-1 - 3-prime edge 
    TCCACCTGCG GTACATCGCG GGTCAATATC TAGTATAATC GTAATTTGGG 
    GATTGATAAA CTTAAGCAAT TGTTGCCTCA TGCGTAATTA AAACGTAGCT 
    TTGATGTGTC AGAAAAATAA AAAGGGTTGC GATTGTTCAA ATTATAGTTT 
    TCTTCGGATT TTTTTTCAGG GGACCGAAAC TCTTCTTGGA ATACGTTTGC 
    CACACCCGGG ATATCTTACG ACAAGGTCGT TCTTAATAGA TGAAAAATTA 
    TTCAAAGGCA TGCGTAATCT CCAATATCTA NAAATTGGTT ATTGGTCAGA 
    TGGGGATCTA CCTCAGAGCC TCGTTTATTT GCCCCTTAAA CTCANATTGC 
    TANAATGGGT TTATTGTCCG TTGAAGTCTT TGCCATCTAC TTTTAGGGCG 
    GAGTATCTAG TTAAACTCAT AATGAANAAT AGTGAGCTTG ANAAACTGTG 
    GGAAGGAACT CTGGTACNAA TT

AT4G16920.1

Model type
Protein coding
Short Description
Disease resistance protein (TIR-NBS-LRR class) family
Computational Description
Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT4G16950.2); Has 33072 Blast hits to 18315 proteins in 784 species: Archae - 24; Bacteria - 2125; Metazoa - 2462; Fungi - 169; Plants - 26873; Viruses - 34; Other Eukaryotes - 1385 (source: NCBI BLink).
Link
InterPro Scan - TAIR