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13-3638-1

13-3638-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 3; Position: 2651208 [Map]; Strand: w
  - AT3G08720.1 - [+] show detail - serine/threonine protein kinase 2
    Distance: -48; Region: promoter
  - AT3G08720.2 - [+] show detail - serine/threonine protein kinase 2
    Distance: -223; Region: promoter
Flanking Genome Sequence: 13-3638-1 - 5-prime edge
```
GGAAAGAGGG TAATGTGCCA AACCAAAAAA GGAAAAGGTT TTAAGAAGGC 
GCGTGGCTAC ATTTTTTATG TCTTCCGAAG CATCGTGGAT CATGGGGTGA 
GGACACGTGT TCGTGTTCTA TTGGGAAACC GAACTTCTTC TTTGTTTTAG 
TGGGCCGGAA TT
```

3 prime edge [+] show sequence

Chromosome: 3; Position: 2651092 [Map]; Strand: w
- AT3G08720.1 - [+] show detail - serine/threonine protein kinase 2
  Distance: 0; Region: exon1 (5UTR)
- AT3G08720.2 - [+] show detail - serine/threonine protein kinase 2
  Distance: -107; Region: promoter

CTCTTTCCTG TTAAAGTTGT CTCGTCTCCT TCTCGTCTCC TTCCTCAAGC 
ATATTCTCTG GTAATTCCTC TCTCTCTGTC TCTCTTTGAC TTTTCTCTCG 
CAGAGTTTAG ATTCTTTTTT TTTCTGGATA TAAATTATTT ACACCGACAC 
CGAAACCTTC TAGGTCCAGG TCATAGTTTT ACTCTATATC TGGATTTGTT 
TGAAAATTGC TTGTGTTATG CGCCAGCTTT TTCCCTAATA TATAGACTAG 
GTCTTAATTA CAGATATTAN AGTTCGTTTC CTCGAGGGTT TCTTTCGACC 
TCGTGTCCTG GNGAAATTTT GGAATT

AT3G08720.1

Model type: Protein coding
Short Description: serine/threonine protein kinase 2
Curator Summary: Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins.
Computational Description: serine/threonine protein kinase 2 (S6K2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase, C-terminal (InterPro:IPR017892), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: protein-serine kinase 1 (TAIR:AT3G08730.1); Has 133901 Blast hits to 131707 proteins in 4554 species: Archae - 204; Bacteria - 15943; Metazoa - 48718; Fungi - 13429; Plants - 32816; Viruses - 561; Other Eukaryotes - 22230 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G08720.2

Model type: Protein coding
Short Description: serine/threonine protein kinase 2
Curator Summary: Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins.
Computational Description: Arabidopsis thaliana protein kinase 19 (ATPK19); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, C-terminal (InterPro:IPR017892), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: protein-serine kinase 1 (TAIR:AT3G08730.1); Has 133901 Blast hits to 131707 proteins in 4554 species: Archae - 204; Bacteria - 15943; Metazoa - 48718; Fungi - 13429; Plants - 32816; Viruses - 561; Other Eukaryotes - 22230 (source: NCBI BLink).
Link: InterPro Scan - TAIR