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Mutant Lines
13-3654-1

13-3654-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 2; Position: 158585 [Map]; Strand: w
  - AT2G01320.3 - [+] show detail - ABC-2 type transporter family protein
    Distance: -403; Region: promoter
  - AT2G01320.2 - [+] show detail - ABC-2 type transporter family protein
    Distance: -403; Region: promoter
  - AT2G01320.4 - [+] show detail - ABC-2 type transporter family protein
    Distance: -403; Region: promoter
  - AT2G01320.1 - [+] show detail - ABC-2 type transporter family protein
    Distance: -403; Region: promoter
  - AT2G01330.1 - [+] show detail - nucleotide binding
    Distance: 0; Region: exon6 (CDS)
  - AT2G01330.2 - [+] show detail - nucleotide binding
    Distance: 0; Region: exon6 (CDS)
Flanking Genome Sequence: 13-3654-1 - 3-prime edge
```
TAAACAGCTT GGCATGGTCA CCAAACAACA AGATGGTAGC CACAGGGTCC 
ATAGACACTT GCGTCATTGT ATATGAAGTG GACAAGCCAG CTTCAAGTCG 
CATAACCGCA AGAAACGCTC ATCTCGGTGG AGTGAACGCA GTCGCCTTCA 
TTGATGATTG CACCGTAGCA AGTTCCGGAG AAGACGCTTC CGTTCGTTTG 
TGGCATATCG AACCTCAGTG ACTTGTCGTT ATAAGCT
```

5 prime edge [+] show sequence

Chromosome: 2; Position: 158643 [Map]; Strand: w
- AT2G01320.3 - [+] show detail - ABC-2 type transporter family protein
  Distance: -461; Region: promoter
- AT2G01320.2 - [+] show detail - ABC-2 type transporter family protein
  Distance: -461; Region: promoter
- AT2G01320.4 - [+] show detail - ABC-2 type transporter family protein
  Distance: -461; Region: promoter
- AT2G01320.1 - [+] show detail - ABC-2 type transporter family protein
  Distance: -461; Region: promoter
- AT2G01330.1 - [+] show detail - nucleotide binding
  Distance: 0; Region: exon6 (CDS)
- AT2G01330.2 - [+] show detail - nucleotide binding
  Distance: 0; Region: exon6 (CDS)

ATAAACTAAC AAAATCGGTT ATACGATAAC GGTCGGTACG GGATTTTCCC 
ATCCTACTTT CATCCATACG AGCCGTGTGG AACAACATGT TGTTTAGCTT 
CACCTGCAAA ACAAAAACCG CACTTCCAGG TTAGCGTTTA AGCATGATTG 
AACATATAAG ACATACAAGA ACAACTCTAA TCACNGTCAC CTGTTTGGTC 
TCGCGATCCC AGACTACAGC TTCGCGGTTG GCATCACCAG AAGCAAACAT 
TGTTAAGTCA GGAGAGTAAC GTATCACTGT CAAAGCACCT CTGTGTTTCT 
CCAGGACTGC TTCCTCTTTG AGGTTGTTGT CCCCTGAGAC TGAGTATATG 
TGTAACTTCC CGTCTTGCCC TCCTACAATC GCTTCTTTCC CGTCAGGTGA 
GATCACAGAG GCTGCCACAG CAAAACCCAA ATCGATCTTG CTCAAAATGT 
TCAGACCATT GAGCAATACA ACTCCGGAAT CAAACGAGAC TAGTGCTGTG 
GCTTCGGGAG AATCAACGGC TATGCTTATG TCCAGAGGCT GATGGCCTAT 
ATCGACATGT TCTGCAGCTC CATATCCGTT GTCGGTTAAA GGAATT

AT2G01320.1

Model type: Protein coding
Short Description: ABC-2 type transporter family protein
Computational Description: ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 387535 Blast hits to 354405 proteins in 4108 species: Archae - 7090; Bacteria - 308145; Metazoa - 8600; Fungi - 6710; Plants - 5407; Viruses - 19; Other Eukaryotes - 51564 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01320.2

Model type: Protein coding
Short Description: ABC-2 type transporter family protein
Computational Description: ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 387358 Blast hits to 354249 proteins in 4108 species: Archae - 7085; Bacteria - 307995; Metazoa - 8597; Fungi - 6708; Plants - 5391; Viruses - 19; Other Eukaryotes - 51563 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01320.3

Model type: Protein coding
Short Description: ABC-2 type transporter family protein
Computational Description: ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 387349 Blast hits to 354243 proteins in 4108 species: Archae - 7085; Bacteria - 307989; Metazoa - 8597; Fungi - 6708; Plants - 5387; Viruses - 19; Other Eukaryotes - 51564 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01320.4

Model type: Protein coding
Short Description: ABC-2 type transporter family protein
Computational Description: ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01330.1

Model type: Protein coding
Short Description: nucleotide binding
Computational Description: nucleotide binding; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT3G18060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01330.2

Model type: Protein coding
Short Description: nucleotide binding
Computational Description: nucleotide binding; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT3G18060.1).
Link: InterPro Scan - TAIR