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13-3733-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23416750 [Map]; Strand: w
      • AT3G63410.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 0; Region: exon1 (CDS)
      • AT3G63420.1 - [+] show detail - Ggamma-subunit 1
        Distance: -522; Region: promoter
      • AT3G63420.2 - [+] show detail - Ggamma-subunit 1
        Distance: -567; Region: promoter
    Flanking Genome Sequence: 13-3733-1 - 5-prime edge 
    GCTGAGATCC GCTGGCTCAA GAGCGTCGTC TCTCATATCC TCGGTCCAAT 
    GCCCAGGATT GATGACATGG TCGTATACGA TGGATAAGAA CCTGTAGAAC 
    CAGTAAGCCT CCTTCTTGTG CTTGAATGAA CCTAGGTTGC GCCGATGGCC 
    GGGAAGACGA CACGCTGCTG CTGCTGCATC TAGTAGCCAC CGAGAGTCTA 
    GGTGTGGAGG TTCGGGTAAC TGAGAGTAAG GTCGGCCGAG GAATCGATCT 
    GGCATGCAAA TTGGAACCAG GGGAACCTAA ACCTTTGGGG AAGGTAATGG 
    CCCCGTTGAG CATCAAAGAG GCCATCGATG ACAGATCCAC CAAGTTGAGA 
    AGAGGGAAGA AGAAGCT

AT3G63410.1

Model type
Protein coding
Short Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curator Summary
Encodes a MPBQ/MSBQ methyltransferase located in the chloroplast inner envelope membrane. Mutant plants lack plastoquinone (PQ), suggesting that the APG1 protein is involved in the methylation step of PQ biosynthesis. The gene product is also involved in tocopherol (vitamin E) biosynthesis.
Computational Description
ALBINO OR PALE GREEN MUTANT 1 (APG1); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity; INVOLVED IN: plastoquinone biosynthetic process, vitamin E biosynthetic process; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); Has 7919 Blast hits to 7917 proteins in 1885 species: Archae - 394; Bacteria - 5939; Metazoa - 115; Fungi - 139; Plants - 226; Viruses - 0; Other Eukaryotes - 1106 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G63420.1

Model type
Protein coding
Short Description
Ggamma-subunit 1
Curator Summary
heterotrimeric G protein gamma-subunit (AGG1) mRNA,
Computational Description
Ggamma-subunit 1 (GG1); FUNCTIONS IN: GTP binding; INVOLVED IN: defense response to fungus, incompatible interaction, acropetal auxin transport, seed germination, lateral root development; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: G-protein gamma subunit 2 (TAIR:AT3G22942.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G63420.2

Model type
Protein coding
Short Description
Ggamma-subunit 1
Curator Summary
heterotrimeric G protein gamma-subunit (AGG1) mRNA,
Computational Description
Ggamma-subunit 1 (GG1); FUNCTIONS IN: GTP binding; INVOLVED IN: defense response to fungus, incompatible interaction, acropetal auxin transport, seed germination, lateral root development; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: G-protein gamma subunit 2 (TAIR:AT3G22942.1); Has 72 Blast hits to 72 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR