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13-3737-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3164057 [Map]; Strand: c
      • AT5G10100.2 - [+] show detail - Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
        Distance: 2349; Region: intergenic
      • AT5G10110.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 2382; Region: intergenic
    Flanking Genome Sequence: 13-3737-1 - 5-prime edge 
    CTGCTTCCTG CCTCACCCAT GTGTTAGGTT TTCGTTTTTT TTCTTTTCTT 
    TTCCTTTTTT AGTTTTTGCT GCTTTTTTCT TTTATTTTTA ATATATAGTA 
    TATTTTAACG CATCTCAATT AAAAACTGTG GATTCTACCT TTGGCCAAAG 
    GAGTAAGTGG AATCCAATTT GGCCAATCTC AACTCTTCTC ATTGCCACGT 
    CAGTATTGCC ACTTTATATT AGCTAACTTT TANAAGTTTC GCAACATTTC 
    TTTGAATT

AT5G10100.2

Model type
Protein coding
Short Description
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Computational Description
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: catalytic activity, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: embryo, root; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G65140.1).
Link
InterPro Scan - TAIR

AT5G10110.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR